Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34085

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,074,877	-				+0.6
3,074,877	-				-2.5
3,074,877	-				-2.8
3,074,945	+		RR42_RS34080	0.16	+0.6
3,074,945	+		RR42_RS34080	0.16	+0.2
3,074,946	-		RR42_RS34080	0.16	-1.4
3,074,946	-		RR42_RS34080	0.16	+0.4
3,074,946	-		RR42_RS34080	0.16	-2.4
3,075,086	+		RR42_RS34080	0.32	+1.0
3,075,087	-		RR42_RS34080	0.33	+0.2
3,075,087	-		RR42_RS34080	0.33	+2.8
3,075,241	+		RR42_RS34080	0.50	-0.4
3,075,242	-		RR42_RS34080	0.51	+1.0
3,075,260	-		RR42_RS34080	0.53	-0.8
3,075,533	+		RR42_RS34080	0.84	-1.4
3,075,534	-		RR42_RS34080	0.85	-0.8
3,075,535	+		RR42_RS34080	0.85	-1.1
3,075,535	+		RR42_RS34080	0.85	+0.2
3,075,535	+		RR42_RS34080	0.85	+1.2
3,075,535	+		RR42_RS34080	0.85	+0.6
3,075,535	+		RR42_RS34080	0.85	+0.1
3,075,535	+		RR42_RS34080	0.85	+0.0
3,075,536	-		RR42_RS34080	0.85	-1.6
3,075,587	+				+0.7
3,075,587	+				-0.9
3,075,587	+				+0.0
3,075,587	+				-0.8
3,075,587	+				-1.0
3,075,587	+				+0.2
3,075,587	+				+0.6
3,075,588	-				-0.0
3,075,588	-				+0.7
3,075,588	-				+1.1
3,075,588	-				+1.9
3,075,588	-				-3.0
3,075,656	-				+0.6
3,075,799	+				-0.8
3,075,926	-		RR42_RS34085	0.11	-3.1
3,075,926	-		RR42_RS34085	0.11	-0.3
3,075,981	+		RR42_RS34085	0.19	-2.9
3,075,981	+		RR42_RS34085	0.19	-1.4
3,076,083	-		RR42_RS34085	0.36	-0.2
3,076,125	+		RR42_RS34085	0.42	-1.5
3,076,125	+		RR42_RS34085	0.42	+1.7
3,076,126	-		RR42_RS34085	0.42	-0.8
3,076,228	-		RR42_RS34085	0.58	-0.1
3,076,228	-		RR42_RS34085	0.58	-0.4
3,076,266	+		RR42_RS34085	0.64	+0.3
3,076,267	-		RR42_RS34085	0.65	+0.4
3,076,310	+		RR42_RS34085	0.71	+0.3
3,076,310	+		RR42_RS34085	0.71	+0.0
3,076,310	+		RR42_RS34085	0.71	-1.3
3,076,315	-		RR42_RS34085	0.72	-2.6
3,076,383	+		RR42_RS34085	0.83	+0.5
3,076,384	-		RR42_RS34085	0.83	+0.1
3,076,438	+				-0.2
3,076,439	-				-1.9
3,076,466	-				+0.1
3,076,510	-				+1.3
3,076,654	+				-0.1
3,076,655	-				+1.5
3,076,655	-				-2.5
3,076,700	+				+0.0
3,076,700	+				+1.2
3,076,700	+				-3.0
3,076,700	+				-2.8
3,076,701	-				-0.2
3,076,703	+				-1.1
3,076,706	-				+1.9
3,076,707	+				+0.7
3,076,707	+				+0.3
3,076,707	+				+0.5
3,076,707	+				+0.2
3,076,707	+				-2.2
3,076,707	+				+1.2
3,076,707	+				-0.8
3,076,708	-				-0.3
3,076,708	-				-0.5
3,076,803	-				-1.4
3,076,803	-				-3.4
3,076,803	-				+0.6
3,076,841	-				-0.4
3,076,959	+		RR42_RS34090	0.27	-1.6
3,076,959	+		RR42_RS34090	0.27	-1.4
3,076,959	+		RR42_RS34090	0.27	-0.9
3,076,960	-		RR42_RS34090	0.27	-0.0
3,076,960	-		RR42_RS34090	0.27	-3.4
3,076,960	-		RR42_RS34090	0.27	+0.7
3,076,960	-		RR42_RS34090	0.27	+0.3
3,076,960	-		RR42_RS34090	0.27	+0.5
3,076,960	-		RR42_RS34090	0.27	-0.3
3,076,963	+		RR42_RS34090	0.28	-0.8
3,076,963	+		RR42_RS34090	0.28	+0.0
3,076,963	+		RR42_RS34090	0.28	+0.3
3,076,963	+		RR42_RS34090	0.28	+0.4
3,076,963	+		RR42_RS34090	0.28	+0.6
3,076,994	-		RR42_RS34090	0.34	-0.0
3,077,000	+		RR42_RS34090	0.35	-2.6
3,077,000	+		RR42_RS34090	0.35	-0.9
3,077,000	+		RR42_RS34090	0.35	-0.1
3,077,000	+		RR42_RS34090	0.35	+0.9
3,077,000	+		RR42_RS34090	0.35	-0.6
3,077,001	-		RR42_RS34090	0.35	-4.1
3,077,001	-		RR42_RS34090	0.35	+0.6
3,077,001	-		RR42_RS34090	0.35	-1.4
3,077,001	-		RR42_RS34090	0.35	-2.3
3,077,001	-		RR42_RS34090	0.35	-1.8
3,077,032	+		RR42_RS34090	0.41	-0.1
3,077,042	+		RR42_RS34090	0.43	+0.6
3,077,043	-		RR42_RS34090	0.44	-0.9
3,077,078	-		RR42_RS34090	0.50	+0.5
3,077,078	-		RR42_RS34090	0.50	-1.4
3,077,081	+		RR42_RS34090	0.51	-1.1
3,077,081	+		RR42_RS34090	0.51	-1.2
3,077,081	+		RR42_RS34090	0.51	-0.0
3,077,081	+		RR42_RS34090	0.51	+0.1
3,077,082	-		RR42_RS34090	0.51	-0.6
3,077,082	-		RR42_RS34090	0.51	+1.9
3,077,082	-		RR42_RS34090	0.51	+2.3
3,077,165	+		RR42_RS34090	0.68	+0.8
3,077,165	+		RR42_RS34090	0.68	+0.2
3,077,165	+		RR42_RS34090	0.68	-1.7
3,077,165	+		RR42_RS34090	0.68	-1.4
3,077,166	-		RR42_RS34090	0.68	-0.4
3,077,166	-		RR42_RS34090	0.68	-0.8
3,077,213	+		RR42_RS34090	0.77	-0.4
3,077,213	+		RR42_RS34090	0.77	-0.2
3,077,213	+		RR42_RS34090	0.77	-1.7
3,077,213	+		RR42_RS34090	0.77	+0.9
3,077,213	+		RR42_RS34090	0.77	+0.8
3,077,213	+		RR42_RS34090	0.77	-0.4
3,077,213	+		RR42_RS34090	0.77	+0.7
3,077,213	+		RR42_RS34090	0.77	-0.2
3,077,213	+		RR42_RS34090	0.77	-1.1
3,077,214	-		RR42_RS34090	0.78	+1.1
3,077,214	-		RR42_RS34090	0.78	-1.5
3,077,214	-		RR42_RS34090	0.78	-1.8
3,077,214	-		RR42_RS34090	0.78	+0.3
3,077,214	-		RR42_RS34090	0.78	+0.0
3,077,325	+				-1.6
3,077,326	-				-0.1
3,077,326	-				+1.7
3,077,326	-				-0.3
3,077,326	-				-2.7
3,077,347	-				-2.4
3,077,347	-				+0.3
3,077,349	+				-0.4
3,077,350	-				+1.1
3,077,381	+				-1.4
3,077,381	+				+0.2
3,077,382	-				-1.4
3,077,382	-				-0.4
3,077,388	+				-2.1
3,077,388	+				+1.5
3,077,388	+				-1.8
3,077,388	+				+0.5
3,077,388	+				-0.2
3,077,389	-				-0.4
3,077,389	-				+1.7
3,077,389	-				+1.4
3,077,488	-				+1.9