Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34065

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,071,051	-				-0.2
3,071,051	-				-2.2
3,071,070	-				-1.1
3,071,070	-				-0.8
3,071,070	-				+1.0
3,071,237	-		RR42_RS34060	0.24	-0.9
3,071,429	-		RR42_RS34060	0.46	-1.4
3,071,731	+		RR42_RS34060	0.81	-2.5
3,071,846	+				-0.6
3,071,847	-				+1.4
3,071,847	-				+0.4
3,071,983	+				+0.6
3,071,984	-				+0.1
3,071,984	-				-1.8
3,071,984	-				-0.2
3,071,984	-				-2.2
3,071,984	-				+0.0
3,071,984	-				-2.0
3,071,984	-				-2.6
3,072,057	+				-0.8
3,072,057	+				-1.6
3,072,058	-				+1.6
3,072,058	-				-0.2
3,072,058	-				-1.0
3,072,301	-		RR42_RS34065	0.30	+0.7
3,072,301	-		RR42_RS34065	0.30	+0.9
3,072,498	+		RR42_RS34065	0.50	-0.1
3,072,499	-		RR42_RS34065	0.50	+0.6
3,072,586	-		RR42_RS34065	0.59	-0.0
3,072,586	-		RR42_RS34065	0.59	-0.1
3,072,640	+		RR42_RS34065	0.64	+0.3
3,072,641	-		RR42_RS34065	0.64	+1.5
3,072,641	-		RR42_RS34065	0.64	-1.4
3,072,802	-		RR42_RS34065	0.81	+0.1
3,072,813	+		RR42_RS34065	0.82	-1.7
3,072,884	-		RR42_RS34065	0.89	-0.2
3,072,884	-		RR42_RS34065	0.89	-0.2
3,072,884	-		RR42_RS34065	0.89	+0.1
3,072,965	+				+1.8
3,073,020	-				-0.9
3,073,020	-				-0.8
3,073,025	-				+0.6
3,073,246	+		RR42_RS34070	0.20	+0.5
3,073,573	+		RR42_RS34070	0.52	-0.2
3,073,579	+		RR42_RS34070	0.53	+0.5
3,073,579	+		RR42_RS34070	0.53	+0.7
3,073,631	+		RR42_RS34070	0.58	-0.8
3,073,632	-		RR42_RS34070	0.58	-0.5
3,073,633	+		RR42_RS34070	0.58	+0.8
3,073,633	+		RR42_RS34070	0.58	+1.7
3,073,815	+		RR42_RS34070	0.76	+0.6
3,073,815	+		RR42_RS34070	0.76	+1.8
3,073,816	-		RR42_RS34070	0.77	-1.4
3,073,866	+		RR42_RS34070	0.82	-0.0
3,073,867	-		RR42_RS34070	0.82	+1.1
3,073,871	+		RR42_RS34070	0.82	-0.1
3,073,871	+		RR42_RS34070	0.82	-1.4
3,073,931	-		RR42_RS34070	0.88	-1.1
3,073,931	-		RR42_RS34070	0.88	-0.5
3,073,931	-		RR42_RS34070	0.88	-2.5