Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33890

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,030,374	+				-0.6
3,030,375	-				-1.7
3,030,375	-				-0.4
3,030,375	-				-2.0
3,030,381	+				+0.8
3,030,381	+				+1.9
3,030,382	-				-0.3
3,030,439	+				-1.0
3,030,440	-				-0.8
3,030,665	-		RR42_RS33885	0.28	-1.4
3,030,718	+		RR42_RS33885	0.33	+0.3
3,030,718	+		RR42_RS33885	0.33	+0.7
3,030,719	-		RR42_RS33885	0.33	-0.4
3,030,719	-		RR42_RS33885	0.33	+1.7
3,030,719	-		RR42_RS33885	0.33	-0.3
3,030,719	-		RR42_RS33885	0.33	+2.8
3,030,719	-		RR42_RS33885	0.33	-2.1
3,031,078	-		RR42_RS33885	0.72	-0.4
3,031,237	+		RR42_RS33885	0.89	-1.3
3,031,275	+				+0.8
3,031,334	-				-0.9
3,031,339	+				-0.2
3,031,346	-				-0.1
3,031,351	+				-0.6
3,031,357	+				+0.4
3,031,358	-				-1.4
3,031,358	-				-0.0
3,031,358	-				+0.9
3,031,538	+		RR42_RS33890	0.11	-3.0
3,031,538	+		RR42_RS33890	0.11	-0.3
3,031,643	+		RR42_RS33890	0.19	+0.5
3,032,276	+		RR42_RS33890	0.62	+0.7
3,032,276	+		RR42_RS33890	0.62	+1.2
3,032,399	+		RR42_RS33890	0.70	+1.5
3,032,400	-		RR42_RS33890	0.71	-0.3
3,032,400	-		RR42_RS33890	0.71	+0.2
3,032,540	+		RR42_RS33890	0.80	+1.2
3,032,541	-		RR42_RS33890	0.80	+0.2
3,032,541	-		RR42_RS33890	0.80	-0.6
3,032,541	-		RR42_RS33890	0.80	+1.5
3,032,590	-		RR42_RS33890	0.84	+0.5
3,032,639	+		RR42_RS33890	0.87	+1.0
3,033,161	-		RR42_RS33895	0.36	-0.6
3,033,172	+		RR42_RS33895	0.38	-1.1
3,033,173	-		RR42_RS33895	0.38	-0.9
3,033,223	+		RR42_RS33895	0.43	+0.7
3,033,224	-		RR42_RS33895	0.43	+0.8
3,033,649	+		RR42_RS33895	0.90	-0.4
3,033,649	+		RR42_RS33895	0.90	+0.7
3,033,650	-		RR42_RS33895	0.90	-0.3
3,033,650	-		RR42_RS33895	0.90	-0.0
3,033,650	-		RR42_RS33895	0.90	-3.5
3,033,792	+		RR42_RS33900	0.24	+0.2
3,033,792	+		RR42_RS33900	0.24	+0.5
3,033,792	+		RR42_RS33900	0.24	-2.0
3,033,801	-		RR42_RS33900	0.29	-0.3