Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33770
Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source Deoxyribonucleic from herring sperm 5 mg/mL |
---|---|---|---|---|---|
remove | |||||
3,004,118 | - | RR42_RS33765 | 0.53 | -0.8 | |
3,004,118 | - | RR42_RS33765 | 0.53 | +2.9 | |
3,004,495 | + | RR42_RS33765 | 0.75 | -0.2 | |
3,004,495 | + | RR42_RS33765 | 0.75 | +0.2 | |
3,004,495 | + | RR42_RS33765 | 0.75 | -0.4 | |
3,004,835 | - | +1.8 | |||
3,005,265 | + | RR42_RS33770 | 0.34 | -1.4 | |
3,005,265 | + | RR42_RS33770 | 0.34 | -1.5 | |
3,005,265 | + | RR42_RS33770 | 0.34 | +0.7 | |
3,005,265 | + | RR42_RS33770 | 0.34 | +0.0 | |
3,005,265 | + | RR42_RS33770 | 0.34 | +1.0 | |
3,005,266 | - | RR42_RS33770 | 0.34 | +0.1 | |
3,005,266 | - | RR42_RS33770 | 0.34 | +1.4 | |
3,005,331 | + | RR42_RS33770 | 0.41 | -1.6 | |
3,005,332 | - | RR42_RS33770 | 0.41 | +0.2 | |
3,005,620 | + | RR42_RS33770 | 0.70 | -0.2 | |
3,005,750 | + | RR42_RS33770 | 0.84 | -0.6 | |
3,005,750 | + | RR42_RS33770 | 0.84 | -0.8 | |
3,005,948 | - | -0.0 |
Or see this region's nucleotide sequence