Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33510

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,932,348	-		RR42_RS33500	0.81	+2.3
2,932,475	+				+1.4
2,932,476	-				+0.1
2,932,476	-				-3.5
2,932,476	-				-1.9
2,932,588	+				+2.8
2,932,588	+				+2.3
2,932,588	+				+2.5
2,932,588	+				+0.1
2,932,589	-				+1.8
2,932,589	-				-1.4
2,932,589	-				+2.1
2,932,591	+				+1.5
2,932,592	-				-1.5
2,932,592	-				-0.3
2,932,658	+				+1.7
2,932,674	+				+2.6
2,932,674	+				+2.4
2,932,674	+				+2.0
2,932,691	+				+2.6
2,932,691	+				+3.1
2,932,691	+				+2.1
2,932,692	-				-0.4
2,932,692	-				+0.2
2,932,693	+				+2.4
2,932,693	+				+2.1
2,932,694	-				-1.2
2,932,694	-				-1.1
2,932,804	+				-0.1
2,932,950	+		RR42_RS33505	0.34	+0.1
2,933,000	+		RR42_RS33505	0.45	+1.1
2,933,000	+		RR42_RS33505	0.45	+0.9
2,933,001	-		RR42_RS33505	0.45	-1.2
2,933,001	-		RR42_RS33505	0.45	+1.0
2,933,112	+		RR42_RS33505	0.68	-2.8
2,933,112	+		RR42_RS33505	0.68	-0.0
2,933,113	-		RR42_RS33505	0.69	-0.5
2,933,113	-		RR42_RS33505	0.69	-1.7
2,933,113	-		RR42_RS33505	0.69	-0.2
2,933,113	-		RR42_RS33505	0.69	-0.9
2,933,365	+				-1.3
2,933,365	+				-2.2
2,933,419	+				-3.2
2,933,420	-				-1.8
2,933,420	-				-1.3
2,933,818	+		RR42_RS33510	0.39	-0.1
2,933,818	+		RR42_RS33510	0.39	-0.3
2,933,818	+		RR42_RS33510	0.39	-1.6
2,933,819	-		RR42_RS33510	0.39	-1.9
2,934,010	+		RR42_RS33510	0.54	-0.0
2,934,010	+		RR42_RS33510	0.54	-1.9
2,934,010	+		RR42_RS33510	0.54	-4.3
2,934,010	+		RR42_RS33510	0.54	-0.5
2,934,011	-		RR42_RS33510	0.54	-1.2
2,934,011	-		RR42_RS33510	0.54	-2.0
2,934,151	+		RR42_RS33510	0.65	-0.3
2,934,152	-		RR42_RS33510	0.65	-4.7
2,934,252	-		RR42_RS33510	0.73	-3.0
2,934,621	-				+2.5
2,934,633	+				-1.1
2,934,683	-				+1.5
2,934,687	+				-1.2
2,934,687	+				+1.7
2,934,785	+		RR42_RS33515	0.20	+0.9
2,934,785	+		RR42_RS33515	0.20	+1.4
2,934,786	-		RR42_RS33515	0.21	+1.8
2,934,786	-		RR42_RS33515	0.21	+2.1
2,934,811	-		RR42_RS33515	0.28	+1.6
2,934,811	-		RR42_RS33515	0.28	-2.3
2,934,896	+		RR42_RS33515	0.54	+1.3
2,934,928	+		RR42_RS33515	0.64	+0.1
2,934,928	+		RR42_RS33515	0.64	-0.1
2,934,929	-		RR42_RS33515	0.64	-0.4
2,934,929	-		RR42_RS33515	0.64	+3.0
2,934,970	+		RR42_RS33515	0.76	+0.6
2,934,970	+		RR42_RS33515	0.76	+0.1
2,935,024	+				-2.3
2,935,024	+				+1.1
2,935,025	-				+0.6
2,935,025	-				+1.4
2,935,025	-				+0.3
2,935,121	+				-1.0
2,935,121	+				-0.7
2,935,122	-				+0.0
2,935,124	-				-0.9
2,935,175	-				+1.7
2,935,175	-				+1.5
2,935,315	+				+1.3
2,935,315	+				-0.5
2,935,315	+				+0.1
2,935,316	-				+1.0
2,935,349	+				+0.1
2,935,349	+				+0.3
2,935,350	-				+1.4
2,935,350	-				+1.2
2,935,382	+				-0.3
2,935,382	+				+0.2
2,935,383	-				+1.3
2,935,585	+		RR42_RS33520	0.11	+0.3
2,935,585	+		RR42_RS33520	0.11	+0.2
2,935,585	+		RR42_RS33520	0.11	+0.1
2,935,585	+		RR42_RS33520	0.11	-0.9
2,935,585	+		RR42_RS33520	0.11	-1.5
2,935,585	+		RR42_RS33520	0.11	-0.3