Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33110

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,835,332	+		RR42_RS33105	0.46	-0.5
2,835,332	+		RR42_RS33105	0.46	-1.7
2,835,332	+		RR42_RS33105	0.46	-2.0
2,835,333	-		RR42_RS33105	0.46	-0.7
2,835,333	-		RR42_RS33105	0.46	-2.3
2,835,333	-		RR42_RS33105	0.46	-1.7
2,835,335	+		RR42_RS33105	0.46	-0.2
2,835,335	+		RR42_RS33105	0.46	-1.8
2,835,335	+		RR42_RS33105	0.46	+0.7
2,835,376	+		RR42_RS33105	0.49	+0.4
2,835,378	-		RR42_RS33105	0.49	-0.1
2,835,521	+		RR42_RS33105	0.61	+0.5
2,835,656	+		RR42_RS33105	0.71	+0.9
2,835,657	-		RR42_RS33105	0.71	+2.1
2,835,870	+		RR42_RS33105	0.88	-0.8
2,835,870	+		RR42_RS33105	0.88	-0.5
2,835,929	+				-0.3
2,835,929	+				-1.3
2,835,929	+				-1.0
2,835,929	+				+0.2
2,835,930	-				-0.9
2,835,930	-				+0.2
2,835,930	-				-1.9
2,835,930	-				-1.5
2,835,977	+				-2.5
2,835,978	-				-0.4
2,835,978	-				+0.2
2,836,279	-				+0.5
2,836,279	-				+0.6
2,836,383	+		RR42_RS33110	0.37	+0.1
2,836,389	+		RR42_RS33110	0.39	+0.6
2,836,389	+		RR42_RS33110	0.39	+0.3
2,836,390	-		RR42_RS33110	0.39	-0.2
2,836,390	-		RR42_RS33110	0.39	+0.4
2,836,390	-		RR42_RS33110	0.39	+0.1
2,836,390	-		RR42_RS33110	0.39	+1.1
2,836,390	-		RR42_RS33110	0.39	+2.8
2,836,390	-		RR42_RS33110	0.39	+2.9
2,836,461	+		RR42_RS33110	0.64	+0.5
2,836,541	+				-0.3
2,836,541	+				-3.4
2,836,541	+				+0.3
2,836,542	-				+1.1
2,836,542	-				-0.2
2,836,542	-				+0.7
2,836,542	-				+0.5
2,836,797	+		RR42_RS33115	0.22	+0.1
2,836,797	+		RR42_RS33115	0.22	+0.8
2,836,798	-		RR42_RS33115	0.22	-2.2
2,837,035	-		RR42_RS33115	0.45	-0.1
2,837,035	-		RR42_RS33115	0.45	-3.0
2,837,205	+		RR42_RS33115	0.61	-0.5
2,837,205	+		RR42_RS33115	0.61	-1.7
2,837,310	+		RR42_RS33115	0.72	-0.1
2,837,310	+		RR42_RS33115	0.72	-0.9
2,837,311	-		RR42_RS33115	0.72	-2.5
2,837,311	-		RR42_RS33115	0.72	-1.3
2,837,311	-		RR42_RS33115	0.72	+0.2
2,837,311	-		RR42_RS33115	0.72	+0.2
2,837,311	-		RR42_RS33115	0.72	+0.5
2,837,311	-		RR42_RS33115	0.72	-1.2
2,837,314	+		RR42_RS33115	0.72	+0.6
2,837,314	+		RR42_RS33115	0.72	-1.0
2,837,314	+		RR42_RS33115	0.72	+0.6
2,837,315	-		RR42_RS33115	0.72	-1.2
2,837,344	-		RR42_RS33115	0.75	-0.9
2,837,409	+		RR42_RS33115	0.81	-1.3