Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS32485

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,684,319	-		RR42_RS32480	0.12	-2.0
2,684,417	-		RR42_RS32480	0.25	+1.0
2,684,485	+		RR42_RS32480	0.34	-0.8
2,684,485	+		RR42_RS32480	0.34	-1.2
2,684,593	-		RR42_RS32480	0.48	+1.4
2,684,644	-		RR42_RS32480	0.54	-2.3
2,684,675	-		RR42_RS32480	0.58	-2.6
2,684,752	+		RR42_RS32480	0.68	+0.2
2,684,843	-		RR42_RS32480	0.80	+1.1
2,685,078	+				-3.1
2,685,078	+				+0.4
2,685,079	-				-3.6
2,685,090	+				+0.3
2,685,303	+				-0.3
2,685,304	-				+0.3
2,685,304	-				+0.4
2,685,304	-				-2.0
2,685,323	+		RR42_RS32485	0.11	-0.2
2,685,406	-		RR42_RS32485	0.15	-1.5
2,685,542	+		RR42_RS32485	0.22	-0.8
2,685,542	+		RR42_RS32485	0.22	-0.3
2,685,543	-		RR42_RS32485	0.22	+0.8
2,685,543	-		RR42_RS32485	0.22	+2.6
2,685,543	-		RR42_RS32485	0.22	-2.1
2,685,640	+		RR42_RS32485	0.27	+0.0
2,685,640	+		RR42_RS32485	0.27	-0.7
2,686,331	+		RR42_RS32485	0.64	-0.2
2,686,368	-		RR42_RS32485	0.66	-0.6
2,686,487	+		RR42_RS32485	0.72	-2.0
2,686,487	+		RR42_RS32485	0.72	-0.8
2,686,488	-		RR42_RS32485	0.72	+0.1
2,686,542	-		RR42_RS32485	0.75	+0.8
2,686,757	+		RR42_RS32485	0.87	+0.8
2,686,757	+		RR42_RS32485	0.87	-1.8
2,686,758	-		RR42_RS32485	0.87	+0.5
2,686,758	-		RR42_RS32485	0.87	-1.0
2,686,758	-		RR42_RS32485	0.87	+0.0
2,686,758	-		RR42_RS32485	0.87	+0.0
2,686,758	-		RR42_RS32485	0.87	+0.6
2,686,760	+		RR42_RS32485	0.87	-0.9
2,686,760	+		RR42_RS32485	0.87	-1.3
2,686,761	-		RR42_RS32485	0.87	-1.2
2,686,830	+				+0.4
2,686,831	-				+1.2
2,686,868	+				+0.5
2,686,868	+				+4.0
2,686,869	-				+0.7
2,686,869	-				-1.6
2,686,923	-				-1.1
2,687,460	+		RR42_RS32490	0.49	+1.4
2,687,460	+		RR42_RS32490	0.49	+0.7
2,687,461	-		RR42_RS32490	0.49	+0.7
2,687,505	+		RR42_RS32490	0.55	+0.5
2,687,506	-		RR42_RS32490	0.55	-3.3
2,687,506	-		RR42_RS32490	0.55	-2.4
2,687,638	+		RR42_RS32490	0.71	+0.0
2,687,638	+		RR42_RS32490	0.71	-0.1
2,687,638	+		RR42_RS32490	0.71	+0.8
2,687,638	+		RR42_RS32490	0.71	+1.6
2,687,638	+		RR42_RS32490	0.71	+0.0
2,687,638	+		RR42_RS32490	0.71	+1.7
2,687,638	+		RR42_RS32490	0.71	+1.0
2,687,638	+		RR42_RS32490	0.71	-0.1
2,687,639	-		RR42_RS32490	0.71	+0.1
2,687,886	+				-0.1
2,687,927	+				+0.3