Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31750

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,498,282	-		RR42_RS31740	0.77	+0.5
2,498,282	-		RR42_RS31740	0.77	-0.4
2,498,455	-				+0.4
2,498,455	-				+1.6
2,498,455	-				+0.4
2,498,458	+				+0.9
2,498,458	+				-0.7
2,498,458	+				+0.6
2,498,458	+				-1.7
2,498,497	-				-0.1
2,498,581	-		RR42_RS31745	0.17	+0.4
2,498,637	+		RR42_RS31745	0.25	+1.0
2,498,637	+		RR42_RS31745	0.25	-2.3
2,498,637	+		RR42_RS31745	0.25	+1.1
2,498,638	-		RR42_RS31745	0.25	-0.4
2,498,638	-		RR42_RS31745	0.25	-2.0
2,498,746	-		RR42_RS31745	0.39	+0.8
2,498,746	-		RR42_RS31745	0.39	+1.5
2,498,746	-		RR42_RS31745	0.39	-2.5
2,498,793	-		RR42_RS31745	0.45	-1.0
2,498,793	-		RR42_RS31745	0.45	+0.1
2,498,821	+		RR42_RS31745	0.49	-1.7
2,498,874	+		RR42_RS31745	0.56	-1.2
2,498,875	-		RR42_RS31745	0.56	-3.1
2,498,919	+		RR42_RS31745	0.62	-0.0
2,498,919	+		RR42_RS31745	0.62	+0.0
2,498,919	+		RR42_RS31745	0.62	+0.9
2,498,919	+		RR42_RS31745	0.62	+0.7
2,498,920	-		RR42_RS31745	0.62	+1.1
2,498,920	-		RR42_RS31745	0.62	+1.4
2,499,218	+				-0.9
2,499,219	-				-0.7
2,499,222	+				+0.3
2,499,223	-				+2.3
2,499,241	+				+1.0
2,499,280	+				-0.2
2,499,280	+				-0.0
2,499,281	-				+0.3
2,499,479	-		RR42_RS31750	0.26	+0.0
2,499,724	-		RR42_RS31750	0.58	+0.1
2,499,838	+		RR42_RS31750	0.73	-0.3
2,499,838	+		RR42_RS31750	0.73	-1.6
2,500,012	+				+0.1
2,500,078	-				+0.9
2,500,099	-				+0.7
2,500,128	+				-0.8
2,500,129	-				-0.7
2,500,129	-				-0.5
2,500,129	-				-1.6
2,500,129	-				+1.0
2,500,195	+				-0.6
2,500,195	+				-0.2
2,500,195	+				+2.7
2,500,195	+				-3.0
2,500,195	+				+0.6
2,500,195	+				+1.5
2,500,196	-				-0.7
2,500,196	-				+0.1
2,500,196	-				-0.2
2,500,229	+				-0.7
2,500,294	+				+0.1
2,500,295	-				-2.6
2,500,296	+				-2.3
2,500,296	+				-2.0
2,500,296	+				-0.1