Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31735

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,496,030	+				+0.7
2,496,030	+				+0.9
2,496,135	+				+0.1
2,496,147	+				-1.6
2,496,148	-				+1.1
2,496,148	-				+1.1
2,496,148	-				-0.0
2,496,212	+		RR42_RS31730	0.15	+1.0
2,496,297	+		RR42_RS31730	0.24	+1.0
2,496,297	+		RR42_RS31730	0.24	+1.0
2,496,297	+		RR42_RS31730	0.24	+0.7
2,496,298	-		RR42_RS31730	0.24	+2.2
2,496,298	-		RR42_RS31730	0.24	-1.2
2,496,344	-		RR42_RS31730	0.29	-4.5
2,496,384	+		RR42_RS31730	0.33	+0.5
2,496,384	+		RR42_RS31730	0.33	-3.0
2,496,384	+				+1.0
2,496,385	-		RR42_RS31730	0.33	+0.6
2,496,427	+		RR42_RS31730	0.37	-0.2
2,496,444	-		RR42_RS31730	0.39	+0.9
2,496,459	+		RR42_RS31730	0.41	+0.3
2,496,459	+		RR42_RS31730	0.41	+0.5
2,496,459	+		RR42_RS31730	0.41	-2.0
2,496,459	+		RR42_RS31730	0.41	+0.3
2,496,460	-		RR42_RS31730	0.41	-0.6
2,496,460	-		RR42_RS31730	0.41	-0.2
2,496,765	+		RR42_RS31730	0.73	-0.1
2,496,766	-		RR42_RS31730	0.73	-0.5
2,497,101	+		RR42_RS31735	0.12	-0.6
2,497,255	-		RR42_RS31735	0.32	-1.4
2,497,255	-		RR42_RS31735	0.32	-2.9
2,497,791	-				-1.1
2,497,849	+		RR42_RS31740	0.12	-1.7
2,497,849	+		RR42_RS31740	0.12	+0.4
2,497,850	-		RR42_RS31740	0.12	-0.7
2,497,850	-		RR42_RS31740	0.12	+3.3
2,497,871	-		RR42_RS31740	0.15	-2.6
2,497,948	-		RR42_RS31740	0.27	+1.2
2,497,948	-		RR42_RS31740	0.27	-0.2
2,498,132	-		RR42_RS31740	0.54	+0.1
2,498,282	-		RR42_RS31740	0.77	+0.5
2,498,282	-		RR42_RS31740	0.77	-0.4
2,498,455	-				+0.4
2,498,455	-				+1.6
2,498,455	-				+0.4
2,498,458	+				+0.9
2,498,458	+				-0.7
2,498,458	+				+0.6
2,498,458	+				-1.7
2,498,497	-				-0.1
2,498,581	-		RR42_RS31745	0.17	+0.4
2,498,637	+		RR42_RS31745	0.25	+1.0
2,498,637	+		RR42_RS31745	0.25	-2.3
2,498,637	+		RR42_RS31745	0.25	+1.1
2,498,638	-		RR42_RS31745	0.25	-0.4
2,498,638	-		RR42_RS31745	0.25	-2.0
2,498,746	-		RR42_RS31745	0.39	+0.8
2,498,746	-		RR42_RS31745	0.39	+1.5
2,498,746	-		RR42_RS31745	0.39	-2.5