Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31685

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,487,639	+		RR42_RS31680	0.25	+0.9
2,487,640	-		RR42_RS31680	0.25	+1.1
2,487,711	+		RR42_RS31680	0.33	-0.5
2,487,911	+		RR42_RS31680	0.56	-2.8
2,487,966	+		RR42_RS31680	0.62	+0.1
2,488,192	-		RR42_RS31680	0.87	-1.0
2,488,241	+				-1.1
2,488,242	-				-0.2
2,488,245	+				-0.9
2,488,245	+				+0.1
2,488,246	-				+0.5
2,488,324	+				-0.6
2,488,325	-				+0.3
2,488,520	-				+0.2
2,488,611	+		RR42_RS31685	0.23	-1.8
2,488,612	-		RR42_RS31685	0.23	+1.7
2,488,839	+		RR42_RS31685	0.60	-0.9
2,488,839	+		RR42_RS31685	0.60	+1.0
2,488,839	+		RR42_RS31685	0.60	+0.0
2,488,951	+		RR42_RS31685	0.78	-0.7
2,488,952	-		RR42_RS31685	0.78	-1.2
2,488,979	+		RR42_RS31685	0.82	-3.1
2,489,069	-				+0.1
2,489,069	-				-2.3
2,489,069	-				-0.4
2,489,087	+				-1.8
2,489,088	-				-1.6
2,489,094	-				-0.2
2,489,283	+				+0.6
2,489,315	+				+1.3
2,489,315	+				-0.2
2,489,316	-				-0.6
2,489,399	+		RR42_RS31690	0.21	-1.3
2,489,400	-		RR42_RS31690	0.21	-0.3
2,489,400	-		RR42_RS31690	0.21	+0.8
2,489,415	+		RR42_RS31690	0.24	-0.4
2,489,518	+		RR42_RS31690	0.49	-0.4
2,489,519	-		RR42_RS31690	0.50	-1.9
2,489,697	+				+0.4
2,489,797	-				+2.9
2,489,797	-				-1.7
2,489,976	-		RR42_RS31695	0.45	+0.7
2,490,024	-		RR42_RS31695	0.57	+2.2
2,490,024	-		RR42_RS31695	0.57	-0.1