Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31050

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,345,068	-				-2.1
2,345,077	+				+1.0
2,345,077	+				+0.2
2,345,078	-				-1.9
2,345,305	+		RR42_RS31045	0.29	-0.9
2,345,305	+		RR42_RS31045	0.29	+0.0
2,345,305	+		RR42_RS31045	0.29	-0.4
2,345,306	-		RR42_RS31045	0.29	-0.9
2,345,306	-		RR42_RS31045	0.29	+0.3
2,345,343	+		RR42_RS31045	0.33	-0.2
2,345,344	-		RR42_RS31045	0.34	+0.4
2,345,344	-		RR42_RS31045	0.34	-0.6
2,345,611	+		RR42_RS31045	0.65	-0.8
2,345,612	-		RR42_RS31045	0.65	-2.8
2,345,692	+		RR42_RS31045	0.75	+0.5
2,345,692	+		RR42_RS31045	0.75	-0.2
2,345,839	+				-1.7
2,345,840	-				-1.5
2,345,862	-				-0.4
2,345,904	-				+1.4
2,345,904	-				-0.1
2,345,904	-				+0.1
2,345,904	-				-0.2
2,345,922	+				-0.6
2,345,923	-				+1.3
2,345,931	+				+0.5
2,345,932	-				-0.2
2,345,932	-				+0.5
2,345,940	+				-0.8
2,345,940	+				+1.6
2,345,941	-				+0.6
2,345,949	+				+1.8
2,345,959	-				-0.0
2,346,091	+		RR42_RS31050	0.11	+3.3
2,346,091	+		RR42_RS31050	0.11	-0.6
2,346,185	-		RR42_RS31050	0.21	-1.1
2,346,185	-		RR42_RS31050	0.21	-0.1
2,346,185	-		RR42_RS31050	0.21	-1.1
2,346,185	-		RR42_RS31050	0.21	-0.3
2,346,192	-		RR42_RS31050	0.21	-0.4
2,346,587	+		RR42_RS31050	0.62	-0.1
2,346,588	-		RR42_RS31050	0.62	-1.4
2,346,588	-		RR42_RS31050	0.62	-0.2
2,346,818	+		RR42_RS31050	0.86	+0.8
2,346,819	-		RR42_RS31050	0.86	+0.3
2,346,897	+				+1.3
2,346,898	-				-0.5
2,347,081	+				+0.4
2,347,081	+				-2.2
2,347,081	+				-1.3
2,347,082	-				+0.8
2,347,640	+		RR42_RS31055	0.52	+0.3
2,347,931	-		RR42_RS31055	0.83	+0.9