Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30990

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,333,438	+				+0.3
2,333,438	+				+0.1
2,333,457	-				-1.8
2,333,628	+		RR42_RS30980	0.44	+0.2
2,333,629	-		RR42_RS30980	0.44	-0.6
2,333,841	-				-0.8
2,334,156	+				-0.9
2,334,156	+				+1.0
2,334,192	-				-2.0
2,334,243	-				+0.3
2,334,279	+				-0.9
2,334,434	+				-1.2
2,334,476	-		RR42_RS30990	0.11	-1.2
2,334,560	+		RR42_RS30990	0.32	+0.4
2,334,560	+		RR42_RS30990	0.32	-2.8
2,334,560	+		RR42_RS30990	0.32	+0.5
2,334,709	+		RR42_RS30990	0.69	-1.8
2,334,709	+		RR42_RS30990	0.69	-1.6
2,334,710	-		RR42_RS30990	0.69	+1.8
2,334,746	+		RR42_RS30990	0.78	-0.0
2,334,746	+		RR42_RS30990	0.78	-1.4
2,334,746	+		RR42_RS30990	0.78	-0.4
2,334,747	-		RR42_RS30990	0.79	+0.4
2,334,748	+		RR42_RS30990	0.79	+0.2
2,334,749	-		RR42_RS30990	0.79	+0.6
2,334,791	+		RR42_RS30990	0.90	-0.4
2,334,791	+		RR42_RS30990	0.90	-0.0
2,334,792	-				-1.4
2,334,792	-				+0.3
2,334,800	+				+0.4
2,334,801	-				+0.8
2,334,806	+				+0.7
2,334,807	-				+0.2
2,334,807	-				+1.0
2,334,807	-				+0.4
2,334,860	+				+0.5
2,334,860	+				-2.2
2,335,109	+		RR42_RS30995	0.29	+1.1
2,335,109	+		RR42_RS30995	0.29	+1.4
2,335,109	+		RR42_RS30995	0.29	+0.2
2,335,110	-		RR42_RS30995	0.29	-0.4
2,335,110	-		RR42_RS30995	0.29	-1.0
2,335,196	+		RR42_RS30995	0.41	-1.1
2,335,197	-		RR42_RS30995	0.41	-2.4
2,335,199	+		RR42_RS30995	0.41	-0.4
2,335,232	+		RR42_RS30995	0.46	-0.0
2,335,241	+		RR42_RS30995	0.47	-1.0
2,335,242	-		RR42_RS30995	0.47	+0.3
2,335,242	-		RR42_RS30995	0.47	-0.1
2,335,242	-		RR42_RS30995	0.47	+0.5
2,335,322	+		RR42_RS30995	0.58	-1.1
2,335,322	+		RR42_RS30995	0.58	+0.4
2,335,323	-		RR42_RS30995	0.58	+0.6
2,335,323	-		RR42_RS30995	0.58	-0.2
2,335,398	-		RR42_RS30995	0.68	-1.1
2,335,398	-		RR42_RS30995	0.68	+1.8
2,335,678	+				-0.5
2,335,767	+				-0.3
2,335,768	-				-2.5
2,335,783	+		RR42_RS31000	0.10	+0.6
2,335,784	-		RR42_RS31000	0.10	+0.0
2,335,813	+		RR42_RS31000	0.13	-1.5
2,335,813	+		RR42_RS31000	0.13	-3.4
2,335,814	-		RR42_RS31000	0.13	+0.9
2,335,823	-		RR42_RS31000	0.14	+0.9
2,335,823	-		RR42_RS31000	0.14	+1.0
2,335,826	+		RR42_RS31000	0.14	-2.2
2,335,826	+		RR42_RS31000	0.14	+0.4
2,335,826	+		RR42_RS31000	0.14	-2.7
2,335,827	-		RR42_RS31000	0.14	-1.4
2,335,827	-		RR42_RS31000	0.14	-0.3
2,335,827	-		RR42_RS31000	0.14	+0.9