Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30580

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,236,208	-		RR42_RS30575	0.78	-0.2
2,236,499	+		RR42_RS30575	0.87	+1.8
2,236,500	-		RR42_RS30575	0.87	+0.1
2,236,500	-		RR42_RS30575	0.87	+0.4
2,236,714	+				-0.1
2,236,715	-				+1.3
2,236,799	-				+0.1
2,236,855	+				-0.5
2,236,866	+				-0.2
2,236,867	-				-0.0
2,236,881	+				+1.0
2,236,882	-				-0.0
2,236,882	-				+0.3
2,236,965	-				-0.6
2,237,019	+				-2.1
2,237,020	-				+0.4
2,237,020	-				-0.6
2,237,020	-				-0.6
2,237,020	-				-0.9
2,237,020	-				-3.6
2,237,026	+				+1.2
2,237,026	+				+1.1
2,237,027	-				-0.1
2,237,027	-				-1.5
2,237,027	-				+1.2
2,237,027	-				+0.6
2,237,031	+				+1.5
2,237,032	-				+0.0
2,237,032	-				+1.0
2,237,042	-				-0.2
2,237,148	+				+0.0
2,237,149	-				+1.2
2,237,176	+				+2.1
2,237,338	+		RR42_RS30580	0.12	-2.3
2,237,573	-		RR42_RS30580	0.28	+0.3
2,237,635	+		RR42_RS30580	0.32	-0.0
2,237,636	-		RR42_RS30580	0.32	-0.7
2,237,689	+		RR42_RS30580	0.35	+0.2
2,237,779	+		RR42_RS30580	0.41	+0.7
2,237,779	+		RR42_RS30580	0.41	-0.6
2,237,779	+		RR42_RS30580	0.41	-0.0
2,237,780	-		RR42_RS30580	0.41	+2.4
2,237,780	-		RR42_RS30580	0.41	+1.3
2,237,780	-		RR42_RS30580	0.41	+1.5
2,237,780	-		RR42_RS30580	0.41	+0.6
2,237,780	-		RR42_RS30580	0.41	-0.6
2,237,905	+		RR42_RS30580	0.49	+0.6
2,238,008	-		RR42_RS30580	0.56	-0.8
2,238,558	+				-1.0
2,238,559	-				-1.7
2,238,559	-				-0.7
2,238,746	+				+1.5
2,239,099	+		RR42_RS30585	0.11	+0.4
2,239,100	-		RR42_RS30585	0.11	-0.1
2,239,100	-		RR42_RS30585	0.11	+0.7
2,239,100	-		RR42_RS30585	0.11	-0.2
2,239,141	+		RR42_RS30585	0.13	+1.7
2,239,412	-		RR42_RS30585	0.31	-1.1
2,239,476	+		RR42_RS30585	0.35	-1.0
2,239,477	-		RR42_RS30585	0.35	-0.6
2,239,477	-		RR42_RS30585	0.35	-0.1
2,239,477	-		RR42_RS30585	0.35	+0.8
2,239,477	-		RR42_RS30585	0.35	+1.0
2,239,662	+		RR42_RS30585	0.47	+0.7