Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30495

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,214,036	+				+0.1
2,214,037	-				+0.4
2,214,219	+		RR42_RS30485	0.13	+0.9
2,214,220	-		RR42_RS30485	0.13	+1.5
2,214,221	+		RR42_RS30485	0.14	-0.7
2,214,221	+		RR42_RS30485	0.14	-0.2
2,214,222	-		RR42_RS30485	0.14	+0.3
2,214,284	+		RR42_RS30485	0.31	+0.4
2,214,284	+		RR42_RS30485	0.31	+0.1
2,214,381	-		RR42_RS30485	0.59	-0.0
2,214,408	+		RR42_RS30485	0.66	-0.6
2,214,409	-		RR42_RS30485	0.67	+0.5
2,214,409	-		RR42_RS30485	0.67	+0.5
2,214,494	+				+0.3
2,214,494	+				-0.8
2,214,495	-				-0.0
2,214,517	-				-1.4
2,214,517	-				-1.2
2,214,546	+				-0.2
2,214,547	-				+1.4
2,214,766	-		RR42_RS30490	0.59	+1.1
2,214,900	+				-0.6
2,214,901	-				-2.9
2,215,004	+				+0.3
2,215,004	+				-1.2
2,215,004	+				-0.5
2,215,004	+				+0.3
2,215,005	-				-1.8
2,215,352	+		RR42_RS30495	0.28	-0.6
2,215,352	+		RR42_RS30495	0.28	+0.3
2,215,361	+		RR42_RS30495	0.29	-0.6
2,215,362	-		RR42_RS30495	0.29	-2.9
2,215,362	-		RR42_RS30495	0.29	+0.4
2,215,362	-		RR42_RS30495	0.29	+0.7
2,215,362	-		RR42_RS30495	0.29	-1.6
2,215,368	+		RR42_RS30495	0.29	-0.1
2,215,368	+		RR42_RS30495	0.29	-2.9
2,215,369	-		RR42_RS30495	0.29	-0.6
2,215,369	-		RR42_RS30495	0.29	+2.3
2,215,526	+		RR42_RS30495	0.42	-3.0
2,215,754	+		RR42_RS30495	0.60	-1.6
2,215,754	+		RR42_RS30495	0.60	+0.9
2,215,754	+		RR42_RS30495	0.60	+0.8
2,215,754	+		RR42_RS30495	0.60	+1.1
2,215,755	-		RR42_RS30495	0.61	+0.3
2,215,755	-		RR42_RS30495	0.61	-1.6
2,215,755	-		RR42_RS30495	0.61	+0.5
2,215,852	-		RR42_RS30495	0.68	-0.0
2,215,883	+		RR42_RS30495	0.71	+1.4
2,215,883	+		RR42_RS30495	0.71	+0.2
2,215,884	-		RR42_RS30495	0.71	+0.5
2,216,040	+		RR42_RS30495	0.84	+0.9
2,216,041	-		RR42_RS30495	0.84	-0.0
2,216,264	-				-0.0
2,216,276	+				+0.5
2,216,276	+				-1.4
2,216,306	+				-0.1
2,216,307	-				-0.4
2,216,493	-				+0.2
2,216,791	+		RR42_RS30500	0.17	+1.2
2,216,792	-		RR42_RS30500	0.17	+0.2
2,216,792	-		RR42_RS30500	0.17	+1.0
2,216,794	+		RR42_RS30500	0.17	-2.0
2,216,794	+		RR42_RS30500	0.17	+0.6
2,216,795	-		RR42_RS30500	0.17	-2.4
2,216,795	-		RR42_RS30500	0.17	-3.2
2,216,795	-		RR42_RS30500	0.17	-0.6
2,216,947	+		RR42_RS30500	0.28	-2.0
2,216,947	+		RR42_RS30500	0.28	+0.7
2,216,948	-		RR42_RS30500	0.28	+0.3
2,216,948	-		RR42_RS30500	0.28	+0.0
2,216,948	-		RR42_RS30500	0.28	+0.2
2,216,948	-		RR42_RS30500	0.28	+1.2
2,216,948	-		RR42_RS30500	0.28	+0.7
2,217,094	+		RR42_RS30500	0.39	-1.1
2,217,095	-		RR42_RS30500	0.39	+0.6
2,217,095	-		RR42_RS30500	0.39	+0.0
2,217,095	-		RR42_RS30500	0.39	-1.0