Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30165

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,140,666	+		RR42_RS30160	0.43	-2.0
2,140,666	+		RR42_RS30160	0.43	-2.7
2,140,666	+		RR42_RS30160	0.43	-0.4
2,140,666	+		RR42_RS30160	0.43	-0.2
2,140,667	-		RR42_RS30160	0.43	+1.3
2,140,667	-		RR42_RS30160	0.43	-3.0
2,140,667	-		RR42_RS30160	0.43	-1.3
2,140,748	-		RR42_RS30160	0.50	-0.1
2,140,871	-		RR42_RS30160	0.60	-0.8
2,141,014	+		RR42_RS30160	0.72	+1.4
2,141,014	+		RR42_RS30160	0.72	-0.0
2,141,015	-		RR42_RS30160	0.72	-0.3
2,141,454	-				-0.8
2,141,454	-				-0.4
2,141,507	+				-2.0
2,141,508	-				-1.2
2,141,508	-				-2.4
2,141,526	-				-1.5
2,141,581	+				-0.2
2,141,582	-				-2.2
2,141,645	+		RR42_RS30165	0.10	+1.0
2,141,646	-		RR42_RS30165	0.10	-3.6
2,141,646	-		RR42_RS30165	0.10	+0.2
2,141,660	+		RR42_RS30165	0.11	-0.1
2,141,660	+		RR42_RS30165	0.11	+0.2
2,141,774	+		RR42_RS30165	0.21	-0.2
2,141,774	+		RR42_RS30165	0.21	-0.9
2,141,774	+		RR42_RS30165	0.21	+1.0
2,141,775	-		RR42_RS30165	0.21	-0.1
2,141,775	-		RR42_RS30165	0.21	+1.7
2,141,775	-		RR42_RS30165	0.21	-0.7
2,141,775	-		RR42_RS30165	0.21	-0.1
2,141,778	-		RR42_RS30165	0.21	+1.0
2,141,924	+		RR42_RS30165	0.33	-0.7
2,141,924	+		RR42_RS30165	0.33	+0.5
2,141,925	-		RR42_RS30165	0.34	+1.0
2,141,925	-		RR42_RS30165	0.34	-1.1
2,142,029	+		RR42_RS30165	0.42	+0.7
2,142,029	+		RR42_RS30165	0.42	+0.9
2,142,030	-		RR42_RS30165	0.42	+0.7
2,142,054	+		RR42_RS30165	0.44	+1.1
2,142,055	-		RR42_RS30165	0.44	-0.3
2,142,143	+		RR42_RS30165	0.52	+1.1
2,142,144	-		RR42_RS30165	0.52	-1.0
2,142,182	+		RR42_RS30165	0.55	-0.4
2,142,294	-		RR42_RS30165	0.64	+0.4
2,142,294	-		RR42_RS30165	0.64	+0.9
2,142,294	-		RR42_RS30165	0.64	-2.8
2,142,294	-		RR42_RS30165	0.64	+1.4
2,142,512	-		RR42_RS30165	0.83	+1.3
2,142,626	+				-1.5
2,142,626	+				+0.1
2,142,626	+				+1.3
2,142,627	-				-3.6
2,142,627	-				-1.7
2,142,627	-				+0.8
2,142,627	-				-0.5
2,142,705	-				-0.4
2,142,705	-				+0.0
2,142,705	-				+0.4
2,142,709	-				-1.6
2,142,709	-				-3.1
2,142,709	-				+0.4
2,142,730	+				+0.6
2,142,730	+				+1.8
2,142,733	+				-2.6
2,142,734	-				+0.4
2,142,734	-				+1.1
2,142,845	+				-1.8
2,142,846	-				-1.7
2,142,846	-				-0.2
2,143,034	+		RR42_RS30170	0.25	+0.1
2,143,034	+		RR42_RS30170	0.25	+1.0
2,143,035	-		RR42_RS30170	0.25	+0.8
2,143,035	-		RR42_RS30170	0.25	-0.3
2,143,035	-		RR42_RS30170	0.25	-0.2
2,143,266	+		RR42_RS30170	0.55	+0.5
2,143,272	+		RR42_RS30170	0.56	-1.8
2,143,272	+		RR42_RS30170	0.56	-1.0
2,143,600	-				-1.0
2,143,630	+				-1.4