Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS29605

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,009,368	-				-3.3
2,009,491	+				+0.2
2,009,588	+				+0.1
2,009,621	+				-0.3
2,009,622	-				+1.4
2,009,758	+				-0.2
2,009,759	-				+0.2
2,009,778	+				-2.7
2,009,779	-				-0.3
2,009,791	-				+1.7
2,009,796	+				+2.0
2,009,810	-				-0.5
2,009,825	+				-0.4
2,009,874	-		RR42_RS29600	0.11	+0.3
2,009,883	+		RR42_RS29600	0.13	+0.5
2,009,884	-		RR42_RS29600	0.13	+1.2
2,009,908	+		RR42_RS29600	0.19	-2.2
2,009,959	+		RR42_RS29600	0.32	-1.7
2,009,959	+		RR42_RS29600	0.32	+0.8
2,009,959	+		RR42_RS29600	0.32	+0.3
2,009,960	-		RR42_RS29600	0.32	-0.7
2,009,960	-		RR42_RS29600	0.32	+1.7
2,010,042	+		RR42_RS29600	0.52	+0.8
2,010,042	+		RR42_RS29600	0.52	-0.3
2,010,043	-		RR42_RS29600	0.52	-3.4
2,010,043	-		RR42_RS29600	0.52	+0.9
2,010,102	-		RR42_RS29600	0.67	+1.2
2,010,150	+		RR42_RS29600	0.78	-0.1
2,010,150	+		RR42_RS29600	0.78	+0.2
2,010,150	+		RR42_RS29600	0.78	+0.1
2,010,150	+		RR42_RS29600	0.78	-0.1
2,010,208	-				-0.7
2,010,208	-				-0.0
2,010,233	-				-0.4
2,010,263	+				+0.6
2,010,281	+				-0.3
2,010,342	+				-0.1
2,010,354	-				+1.6
2,010,369	+				-2.4
2,010,389	-				-2.0
2,010,405	-				+0.1
2,010,471	-		RR42_RS29605	0.20	-2.1
2,010,490	+		RR42_RS29605	0.24	-3.1
2,010,556	-		RR42_RS29605	0.37	-0.7
2,010,556	-		RR42_RS29605	0.37	-2.8
2,010,556	-		RR42_RS29605	0.37	+0.2
2,010,609	+		RR42_RS29605	0.47	-0.7
2,010,609	+		RR42_RS29605	0.47	-1.1
2,010,609	+		RR42_RS29605	0.47	-0.6
2,010,609	+		RR42_RS29605	0.47	-0.7
2,010,610	-		RR42_RS29605	0.48	-0.2
2,010,828	+				-3.5
2,010,829	-				-0.7
2,010,916	+				-1.1
2,010,917	-				+0.3
2,010,917	-				+3.4
2,010,938	+				-0.2
2,010,938	+				+0.6
2,010,938	+				-2.7
2,010,938	+				-2.3
2,010,939	-				+0.0
2,010,939	-				+0.9
2,010,939	-				+0.7
2,010,947	-				+1.2
2,010,947	-				+0.1
2,011,037	+				-1.7
2,011,038	-				-2.0
2,011,038	-				+0.2
2,011,080	+				+0.0
2,011,114	-				+0.3
2,011,179	+				+0.1
2,011,179	+				-0.9
2,011,180	-				-1.8
2,011,180	-				-1.2
2,011,180	-				-0.3
2,011,249	+				-3.6
2,011,249	+				-0.5
2,011,250	-				+1.7
2,011,250	-				+2.1
2,011,250	-				-2.5
2,011,314	+				-0.6
2,011,314	+				+1.6
2,011,314	+				-0.9
2,011,314	+				+0.8
2,011,315	-				-2.7
2,011,315	-				-0.2
2,011,315	-				-0.1
2,011,384	+				+0.7
2,011,384	+				+0.3
2,011,503	+				+0.0
2,011,504	-				-1.6
2,011,704	+		RR42_RS29610	0.57	-2.2
2,011,704	+		RR42_RS29610	0.57	-0.4
2,011,705	-		RR42_RS29610	0.57	-0.7
2,011,843	+				-0.9