Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS29075

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
1,877,904	+		RR42_RS29070	0.47	+0.5
1,877,905	-		RR42_RS29070	0.47	-0.3
1,877,905	-		RR42_RS29070	0.47	+1.6
1,877,914	+		RR42_RS29070	0.48	-0.3
1,877,914	+		RR42_RS29070	0.48	+0.4
1,877,914	+		RR42_RS29070	0.48	+0.5
1,877,955	-		RR42_RS29070	0.52	+0.7
1,877,955	-		RR42_RS29070	0.52	-0.6
1,877,955	-		RR42_RS29070	0.52	+0.0
1,877,955	-		RR42_RS29070	0.52	+1.4
1,878,025	-		RR42_RS29070	0.57	-0.1
1,878,186	+		RR42_RS29070	0.71	+1.1
1,878,186	+		RR42_RS29070	0.71	+0.7
1,878,186	+		RR42_RS29070	0.71	-0.2
1,878,187	-		RR42_RS29070	0.71	-0.6
1,878,187	-		RR42_RS29070	0.71	-0.1
1,878,187	-		RR42_RS29070	0.71	-2.3
1,878,360	+		RR42_RS29070	0.85	-1.4
1,878,361	-		RR42_RS29070	0.85	+0.8
1,878,645	+				-0.4
1,878,650	+				-0.7
1,878,651	-				+1.4
1,878,657	+				+1.3
1,878,716	+				-0.3
1,878,717	-				-0.3
1,878,851	+		RR42_RS29075	0.15	-1.9
1,878,851	+		RR42_RS29075	0.15	+1.6
1,878,851	+		RR42_RS29075	0.15	+1.5
1,878,852	-		RR42_RS29075	0.15	-0.7
1,878,852	-		RR42_RS29075	0.15	-1.1
1,878,852	-		RR42_RS29075	0.15	-1.9
1,878,918	+		RR42_RS29075	0.22	+0.1
1,879,038	+		RR42_RS29075	0.35	+1.9
1,879,039	-		RR42_RS29075	0.35	-0.3
1,879,075	-		RR42_RS29075	0.38	+0.1
1,879,110	+		RR42_RS29075	0.42	+0.6
1,879,110	+		RR42_RS29075	0.42	-1.5
1,879,110	+		RR42_RS29075	0.42	-0.3
1,879,111	-		RR42_RS29075	0.42	-0.5
1,879,111	-		RR42_RS29075	0.42	-0.4
1,879,111	-		RR42_RS29075	0.42	+0.1
1,879,112	+		RR42_RS29075	0.42	-0.4
1,879,530	+		RR42_RS29075	0.86	-0.3
1,879,530	+		RR42_RS29075	0.86	-0.1
1,879,530	+		RR42_RS29075	0.86	-0.4
1,879,530	+		RR42_RS29075	0.86	-0.1
1,879,531	-		RR42_RS29075	0.86	+1.7
1,879,531	-		RR42_RS29075	0.86	-1.1
1,879,531	-		RR42_RS29075	0.86	-1.9
1,879,531	-		RR42_RS29075	0.86	+1.1
1,879,665	+				+0.3
1,879,991	+		RR42_RS29080	0.25	-0.9
1,880,027	-		RR42_RS29080	0.29	-2.1
1,880,039	+		RR42_RS29080	0.31	-1.8
1,880,040	-		RR42_RS29080	0.31	+0.0
1,880,063	+		RR42_RS29080	0.33	-1.2
1,880,075	+		RR42_RS29080	0.35	-1.4
1,880,076	-		RR42_RS29080	0.35	+0.6
1,880,105	+		RR42_RS29080	0.38	+2.2
1,880,250	-		RR42_RS29080	0.54	-0.7
1,880,293	-		RR42_RS29080	0.58	+0.3
1,880,330	+		RR42_RS29080	0.62	-0.9
1,880,330	+		RR42_RS29080	0.62	+1.3
1,880,384	+		RR42_RS29080	0.68	+0.0
1,880,477	+		RR42_RS29080	0.78	-0.5
1,880,477	+		RR42_RS29080	0.78	-2.0
1,880,569	+		RR42_RS29080	0.89	-1.8
1,880,569	+		RR42_RS29080	0.89	+0.8
1,880,569	+		RR42_RS29080	0.89	-0.5
1,880,569	+		RR42_RS29080	0.89	+0.8
1,880,570	-		RR42_RS29080	0.89	+0.4
1,880,570	-		RR42_RS29080	0.89	-0.6
1,880,570	-		RR42_RS29080	0.89	-0.7
1,880,570	-		RR42_RS29080	0.89	+1.0
1,880,573	+		RR42_RS29080	0.89	+2.7
1,880,573	+		RR42_RS29080	0.89	+1.4
1,880,573	+		RR42_RS29080	0.89	-0.2
1,880,573	+		RR42_RS29080	0.89	-0.7
1,880,573	+		RR42_RS29080	0.89	+0.0
1,880,573	+		RR42_RS29080	0.89	+0.7
1,880,574	-		RR42_RS29080	0.89	+0.9
1,880,574	-		RR42_RS29080	0.89	-0.3
1,880,574	-		RR42_RS29080	0.89	+0.2
1,880,574	-		RR42_RS29080	0.89	-0.0
1,880,574	-		RR42_RS29080	0.89	+0.1
1,880,574	-		RR42_RS29080	0.89	+0.6