Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS29055

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
1,873,436	+		RR42_RS29050	0.50	+0.4
1,874,075	+				-2.9
1,874,076	-				-3.6
1,874,076	-				+0.7
1,874,178	+				+0.3
1,874,179	-				-0.7
1,874,179	-				+0.3
1,874,187	+				+0.3
1,874,187	+				+0.7
1,874,187	+				-0.0
1,874,187	+				+0.5
1,874,224	-				-1.7
1,874,387	+		RR42_RS29055	0.17	-0.3
1,874,389	+		RR42_RS29055	0.17	-2.3
1,874,389	+		RR42_RS29055	0.17	+0.2
1,874,390	-		RR42_RS29055	0.17	-0.1
1,874,390	-		RR42_RS29055	0.17	-0.7
1,874,390	-		RR42_RS29055	0.17	+0.4
1,874,390	-		RR42_RS29055	0.17	-2.1
1,874,791	+		RR42_RS29055	0.61	-0.1
1,874,792	-		RR42_RS29055	0.61	-1.2
1,874,849	-		RR42_RS29055	0.67	+0.4
1,874,849	-		RR42_RS29055	0.67	+0.4
1,874,864	+		RR42_RS29055	0.69	+0.1
1,874,865	-		RR42_RS29055	0.69	-0.0
1,874,865	-		RR42_RS29055	0.69	+0.3
1,874,936	+		RR42_RS29055	0.77	-0.3
1,874,936	+		RR42_RS29055	0.77	+0.1
1,874,998	+		RR42_RS29055	0.83	+1.0
1,874,999	-		RR42_RS29055	0.83	+0.1
1,874,999	-		RR42_RS29055	0.83	-0.2
1,874,999	-		RR42_RS29055	0.83	-2.1
1,875,121	+				+1.5
1,875,121	+				+0.1
1,875,131	-				+0.5
1,875,131	-				+1.6
1,875,285	-				-1.5
1,875,285	-				+1.1
1,875,350	+				-1.0
1,875,351	-				+0.6
1,875,707	+		RR42_RS29060	0.41	-2.5
1,875,707	+		RR42_RS29060	0.41	+0.5
1,875,707	+		RR42_RS29060	0.41	-0.4
1,875,708	-		RR42_RS29060	0.41	-1.1
1,875,824	+		RR42_RS29060	0.53	+1.4
1,875,933	-		RR42_RS29060	0.63	-0.4
1,875,947	+		RR42_RS29060	0.65	+0.5
1,875,948	-		RR42_RS29060	0.65	+0.4
1,875,948	-		RR42_RS29060	0.65	+1.1
1,875,948	-		RR42_RS29060	0.65	+0.1
1,875,995	+		RR42_RS29060	0.69	-2.5