Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28955

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
1,854,232	+		RR42_RS28950	0.68	+1.2
1,854,233	-		RR42_RS28950	0.68	+0.5
1,854,308	+		RR42_RS28950	0.74	-0.6
1,854,308	+		RR42_RS28950	0.74	-0.7
1,854,318	+		RR42_RS28950	0.75	+1.3
1,854,318	+		RR42_RS28950	0.75	-0.1
1,854,364	+		RR42_RS28950	0.79	+0.8
1,854,364	+		RR42_RS28950	0.79	+0.0
1,854,365	-		RR42_RS28950	0.79	+0.4
1,854,365	-		RR42_RS28950	0.79	-0.2
1,854,421	-		RR42_RS28950	0.84	+0.3
1,854,421	-		RR42_RS28950	0.84	-0.0
1,854,421	-		RR42_RS28950	0.84	-2.0
1,854,421	-		RR42_RS28950	0.84	-0.1
1,854,434	+		RR42_RS28950	0.85	+0.0
1,854,435	-		RR42_RS28950	0.85	+0.7
1,854,435	-		RR42_RS28950	0.85	-0.6
1,854,474	+		RR42_RS28950	0.88	+0.9
1,854,475	-		RR42_RS28950	0.88	+1.2
1,854,475	-		RR42_RS28950	0.88	-0.2
1,854,475	-		RR42_RS28950	0.88	+0.7
1,854,570	+				+0.2
1,854,614	+				+2.5
1,854,614	+				-0.9
1,854,615	-				-0.1
1,854,615	-				+1.0
1,854,615	-				-1.9
1,854,615	-				+0.5
1,854,615	-				-0.3
1,854,624	+				+2.0
1,854,625	-				+0.6
1,854,660	+				+0.9
1,854,661	-				-0.5
1,854,800	+				+0.6
1,854,801	-				+0.7
1,854,834	-				+1.5
1,854,999	-				-1.4
1,854,999	-				+1.3
1,854,999	-				+1.2
1,855,141	+				-0.0
1,855,141	+				+0.8
1,855,142	-				+0.8
1,855,142	-				-0.3
1,855,142	-				-2.1
1,855,153	+				+0.3
1,855,212	-				-1.1
1,855,212	-				-0.4
1,855,231	-				+0.1
1,855,231	-				+0.3
1,855,231	-				+0.3
1,855,245	-				-1.4
1,855,245	-				+0.9
1,855,320	+		RR42_RS28955	0.34	+0.5
1,855,321	-		RR42_RS28955	0.34	+0.0
1,855,321	-		RR42_RS28955	0.34	+0.4
1,855,398	+		RR42_RS28955	0.61	+0.3
1,855,398	+		RR42_RS28955	0.61	+0.6
1,855,416	+		RR42_RS28955	0.68	+0.9
1,855,417	-		RR42_RS28955	0.68	+2.2
1,855,505	-				+3.3
1,855,505	-				+1.6
1,855,559	+				-0.7
1,855,560	-				+0.9
1,855,795	+		RR42_RS28960	0.20	-0.2
1,855,795	+		RR42_RS28960	0.20	-2.2
1,855,796	-		RR42_RS28960	0.20	+0.9
1,855,813	+		RR42_RS28960	0.23	-0.8
1,855,813	+		RR42_RS28960	0.23	-0.5
1,855,813	+		RR42_RS28960	0.23	+0.1
1,855,813	+		RR42_RS28960	0.23	+0.7
1,855,813	+		RR42_RS28960	0.23	-0.7
1,855,843	+		RR42_RS28960	0.30	+0.4
1,855,980	+		RR42_RS28960	0.58	-2.0
1,856,018	-		RR42_RS28960	0.66	-2.4
1,856,018	-		RR42_RS28960	0.66	+1.1
1,856,018	-		RR42_RS28960	0.66	-0.6
1,856,399	+		RR42_RS28965	0.34	-0.3
1,856,400	-		RR42_RS28965	0.34	-0.4
1,856,400	-		RR42_RS28965	0.34	-0.7
1,856,400	-		RR42_RS28965	0.34	-0.5