Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28595

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
1,769,835	-				+0.9
1,770,009	+				+0.6
1,770,009	+				-0.6
1,770,069	+				-0.2
1,770,135	+				+1.0
1,770,135	+				-3.1
1,770,136	-				+1.3
1,770,136	-				-0.4
1,770,362	+		RR42_RS28590	0.48	-0.9
1,770,362	+		RR42_RS28590	0.48	+0.1
1,770,362	+		RR42_RS28590	0.48	+0.7
1,770,362	+		RR42_RS28590	0.48	-0.6
1,770,362	+		RR42_RS28590	0.48	-0.1
1,770,362	+		RR42_RS28590	0.48	+0.4
1,770,363	-		RR42_RS28590	0.49	-3.1
1,770,363	-		RR42_RS28590	0.49	-1.5
1,770,363	-		RR42_RS28590	0.49	-0.9
1,770,364	+		RR42_RS28590	0.49	+0.6
1,770,410	+		RR42_RS28590	0.57	+0.8
1,770,410	+		RR42_RS28590	0.57	-0.2
1,770,410	+		RR42_RS28590	0.57	+0.5
1,770,410	+		RR42_RS28590	0.57	+0.6
1,770,410	+		RR42_RS28590	0.57	+1.3
1,770,410	+		RR42_RS28590	0.57	-0.1
1,770,411	-		RR42_RS28590	0.57	-0.9
1,770,411	-		RR42_RS28590	0.57	-0.9
1,770,411	-		RR42_RS28590	0.57	+0.8
1,770,451	+		RR42_RS28590	0.64	+0.9
1,770,685	-				-0.1
1,770,914	-				+2.0
1,771,025	-		RR42_RS28595	0.11	-1.9
1,771,025	-		RR42_RS28595	0.11	+1.7
1,771,025	-		RR42_RS28595	0.11	+2.4
1,771,066	+		RR42_RS28595	0.14	-2.6
1,771,067	-		RR42_RS28595	0.14	+0.1
1,771,286	-		RR42_RS28595	0.25	+1.9
1,771,319	+		RR42_RS28595	0.27	-0.2
1,771,320	-		RR42_RS28595	0.27	+0.9
1,771,408	+		RR42_RS28595	0.31	+1.4
1,771,409	-		RR42_RS28595	0.31	-1.3
1,771,409	-		RR42_RS28595	0.31	+1.3
1,771,589	-		RR42_RS28595	0.41	-2.5
1,771,594	+		RR42_RS28595	0.41	-1.6
1,771,594	+		RR42_RS28595	0.41	-0.1
1,771,594	+		RR42_RS28595	0.41	+1.1
1,771,595	-		RR42_RS28595	0.41	-1.4
1,771,644	+		RR42_RS28595	0.44	-1.6
1,771,644	+		RR42_RS28595	0.44	-0.4
1,771,644	+		RR42_RS28595	0.44	-0.2
1,771,805	-		RR42_RS28595	0.52	-1.1
1,771,912	+		RR42_RS28595	0.58	-2.6
1,771,912	+		RR42_RS28595	0.58	+0.7
1,772,089	+		RR42_RS28595	0.67	+0.6
1,772,168	+		RR42_RS28595	0.71	-0.3
1,772,169	-		RR42_RS28595	0.71	+0.1
1,772,169	-		RR42_RS28595	0.71	-2.4
1,772,230	+		RR42_RS28595	0.74	-0.3
1,772,287	+		RR42_RS28595	0.77	-0.6
1,772,287	+		RR42_RS28595	0.77	+0.6
1,772,287	+		RR42_RS28595	0.77	+0.0
1,772,287	+		RR42_RS28595	0.77	+0.2
1,772,287	+		RR42_RS28595	0.77	+0.1
1,772,287	+		RR42_RS28595	0.77	-1.3
1,772,288	-		RR42_RS28595	0.77	-3.0
1,772,288	-		RR42_RS28595	0.77	+1.1
1,772,288	-		RR42_RS28595	0.77	+0.6
1,772,288	-		RR42_RS28595	0.77	-1.6
1,772,288	-		RR42_RS28595	0.77	+0.9
1,772,288	-		RR42_RS28595	0.77	-2.1
1,772,288	-		RR42_RS28595	0.77	+0.8
1,772,288	-		RR42_RS28595	0.77	-0.1
1,772,289	+		RR42_RS28595	0.77	+0.6
1,772,289	+		RR42_RS28595	0.77	-2.0
1,772,289	+		RR42_RS28595	0.77	-0.9
1,772,289	+		RR42_RS28595	0.77	+0.5
1,772,290	-		RR42_RS28595	0.78	+0.1
1,772,290	-		RR42_RS28595	0.78	+0.4
1,772,293	+		RR42_RS28595	0.78	-0.1
1,772,293	+		RR42_RS28595	0.78	-1.4
1,772,293	+		RR42_RS28595	0.78	-1.7
1,772,293	+		RR42_RS28595	0.78	-0.2
1,772,293	+		RR42_RS28595	0.78	+0.2
1,772,294	-		RR42_RS28595	0.78	+3.0
1,772,294	-		RR42_RS28595	0.78	+0.4
1,772,294	-		RR42_RS28595	0.78	+0.9
1,772,354	-		RR42_RS28595	0.81	-1.3
1,772,354	-		RR42_RS28595	0.81	-0.7
1,772,381	+		RR42_RS28595	0.82	+0.0
1,772,381	+		RR42_RS28595	0.82	+0.4
1,772,381	+		RR42_RS28595	0.82	-3.0
1,772,424	+		RR42_RS28595	0.85	-0.9
1,772,425	-		RR42_RS28595	0.85	+1.5
1,772,425	-		RR42_RS28595	0.85	-0.5
1,772,425	-		RR42_RS28595	0.85	-0.5
1,772,428	+		RR42_RS28595	0.85	-1.0
1,772,428	+		RR42_RS28595	0.85	-3.6
1,772,428	+		RR42_RS28595	0.85	+1.8
1,772,428	+		RR42_RS28595	0.85	+2.0
1,772,429	-		RR42_RS28595	0.85	-0.1
1,772,526	+		RR42_RS28595	0.90	-1.6
1,772,554	+				-0.6
1,772,554	+				-0.9
1,772,554	+				-0.2
1,772,555	-				+1.2
1,772,629	+				-0.5
1,772,629	+				+0.7
1,772,629	+				-1.1
1,772,630	-				-0.8
1,772,630	-				+0.3
1,772,630	-				-0.1
1,772,630	-				+0.8
1,772,630	-				-2.2
1,772,633	-				-0.3
1,772,633	-				+0.1
1,772,659	+				-1.5
1,772,660	-				+1.5
1,772,660	-				-1.4
1,772,719	+				+1.5
1,772,719	+				-0.3
1,772,748	+				+2.0
1,772,748	+				+2.7
1,772,799	+				-0.9
1,772,830	+		RR42_RS28600	0.15	+1.1
1,772,831	-		RR42_RS28600	0.15	-1.2
1,772,893	+		RR42_RS28600	0.29	-1.0
1,772,894	-		RR42_RS28600	0.29	+0.3
1,772,986	+		RR42_RS28600	0.49	+0.1
1,772,987	-		RR42_RS28600	0.49	+0.2
1,772,987	-		RR42_RS28600	0.49	+1.2
1,773,036	-		RR42_RS28600	0.60	+1.1
1,773,179	+				-0.5
1,773,180	-				+0.7
1,773,390	+				-0.9
1,773,390	+				+0.3
1,773,390	+				+1.1
1,773,390	+				-0.7
1,773,390	+				-1.4
1,773,390	+				+0.7
1,773,390	+				-0.5
1,773,391	-				-0.4
1,773,391	-				-0.7
1,773,391	-				-0.7
1,773,391	-				-0.3
1,773,391	-				+0.6
1,773,391	-				+0.9
1,773,393	-				+0.3
1,773,393	-				-0.4
1,773,393	-				+1.7
1,773,393	-				-0.6
1,773,393	-				+1.4
1,773,393	-				-0.2
1,773,477	+				+0.4