Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28220

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
1,686,962	+		RR42_RS28215	0.13	+1.0
1,686,963	-		RR42_RS28215	0.13	-0.5
1,686,963	-		RR42_RS28215	0.13	-1.5
1,687,115	+		RR42_RS28215	0.29	-0.4
1,687,116	-		RR42_RS28215	0.30	-0.2
1,687,247	+		RR42_RS28215	0.44	-2.2
1,687,248	-		RR42_RS28215	0.44	-0.7
1,687,547	+		RR42_RS28215	0.77	+1.0
1,687,547	+		RR42_RS28215	0.77	+1.4
1,687,547	+		RR42_RS28215	0.77	-0.3
1,687,599	-		RR42_RS28215	0.83	-1.8
1,687,674	-				+1.0
1,687,850	+				-0.5
1,687,850	+				+0.5
1,687,851	-				+0.2
1,687,851	-				-1.1
1,687,851	-				+1.1
1,687,857	-				+0.2
1,687,857	-				-0.6
1,687,881	-				-1.4
1,688,061	-		RR42_RS28220	0.31	-0.2
1,688,061	-		RR42_RS28220	0.31	-0.2
1,688,061	-		RR42_RS28220	0.31	-0.1
1,688,195	+		RR42_RS28220	0.49	+1.4
1,688,320	+		RR42_RS28220	0.66	-0.8
1,688,418	+		RR42_RS28220	0.79	+2.1
1,688,418	+		RR42_RS28220	0.79	+0.9
1,688,419	-		RR42_RS28220	0.80	+1.3
1,688,700	+				+1.3
1,688,769	-				-0.6
1,688,785	+				+0.5
1,688,786	-				+0.9
1,688,791	-				-2.8
1,688,795	-				-1.6
1,688,857	+				+0.6
1,688,858	-				+1.0
1,688,899	+				+0.2
1,689,234	-		RR42_RS28225	0.24	-0.6
1,689,494	+		RR42_RS28225	0.36	+0.2