Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS27880
Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source Deoxyribonucleic from herring sperm 5 mg/mL |
---|---|---|---|---|---|
remove | |||||
1,617,210 | - | RR42_RS27875 | 0.52 | +0.7 | |
1,617,210 | - | RR42_RS27875 | 0.52 | -0.6 | |
1,617,299 | + | RR42_RS27875 | 0.57 | +0.3 | |
1,617,300 | - | RR42_RS27875 | 0.57 | -0.4 | |
1,617,446 | + | RR42_RS27875 | 0.65 | +0.9 | |
1,617,446 | + | RR42_RS27875 | 0.65 | +0.0 | |
1,617,706 | + | RR42_RS27875 | 0.80 | -0.5 | |
1,617,707 | - | RR42_RS27875 | 0.80 | +0.5 | |
1,617,980 | - | +0.2 | |||
1,618,094 | - | -1.8 | |||
1,619,002 | - | -0.4 | |||
1,619,507 | + | RR42_RS27885 | 0.49 | +0.5 | |
1,619,557 | + | RR42_RS27885 | 0.55 | -0.6 | |
1,619,565 | - | RR42_RS27885 | 0.56 | +1.7 |
Or see this region's nucleotide sequence