Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS27135

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
1,438,073	-				-0.2
1,438,073	-				+0.1
1,438,172	+				-0.2
1,438,454	+		RR42_RS27130	0.36	-1.8
1,438,454	+		RR42_RS27130	0.36	-0.1
1,438,593	+		RR42_RS27130	0.54	-2.1
1,438,595	+		RR42_RS27130	0.54	+0.7
1,438,608	-		RR42_RS27130	0.55	-1.4
1,438,608	-		RR42_RS27130	0.55	+0.5
1,438,694	+		RR42_RS27130	0.66	+0.1
1,438,957	-				+0.2
1,438,957	-				+1.0
1,438,969	+				+1.1
1,438,969	+				+1.3
1,438,970	-				+1.4
1,438,970	-				+1.3
1,439,007	-				-0.3
1,439,014	+				+0.1
1,439,014	+				-1.3
1,439,035	-				-0.4
1,439,035	-				-2.6
1,439,035	-				+0.6
1,439,038	+				+1.0
1,439,344	+		RR42_RS27135	0.40	+0.8
1,439,344	+		RR42_RS27135	0.40	-0.3
1,439,344	+		RR42_RS27135	0.40	-1.6
1,439,344	+		RR42_RS27135	0.40	+0.8
1,439,344	+		RR42_RS27135	0.40	+2.6
1,439,344	+		RR42_RS27135	0.40	+0.1
1,439,345	-		RR42_RS27135	0.40	+1.1
1,439,345	-		RR42_RS27135	0.40	-0.3
1,439,345	-		RR42_RS27135	0.40	+0.0
1,439,367	-		RR42_RS27135	0.44	+0.3
1,439,827	+				+0.5
1,439,828	-				+0.7
1,439,902	+				-0.2
1,440,235	+				+0.5
1,440,235	+				+0.0
1,440,235	+				-1.3
1,440,235	+				+0.1
1,440,235	+				-1.3
1,440,236	-				+0.1
1,440,236	-				-1.6
1,440,236	-				+0.0
1,440,236	-				-0.0
1,440,236	-				-0.1
1,440,373	+		RR42_RS27140	0.19	-2.7
1,440,546	+		RR42_RS27140	0.30	+0.4
1,440,546	+		RR42_RS27140	0.30	+0.1
1,440,547	-		RR42_RS27140	0.30	+0.1
1,440,547	-		RR42_RS27140	0.30	-2.1
1,440,547	-		RR42_RS27140	0.30	+0.1
1,440,547	-		RR42_RS27140	0.30	+0.2
1,440,557	-		RR42_RS27140	0.31	-0.7
1,440,559	+		RR42_RS27140	0.31	-1.5
1,440,718	+		RR42_RS27140	0.42	-0.9
1,440,718	+		RR42_RS27140	0.42	+0.4
1,440,718	+		RR42_RS27140	0.42	-0.3
1,440,719	-		RR42_RS27140	0.42	-0.7