Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS26780
Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source Deoxyribonucleic from herring sperm 5 mg/mL |
---|---|---|---|---|---|
remove | |||||
1,359,822 | + | RR42_RS26775 | 0.47 | -0.2 | |
1,359,822 | + | RR42_RS26775 | 0.47 | -0.1 | |
1,359,822 | + | RR42_RS26775 | 0.47 | +1.9 | |
1,360,209 | + | RR42_RS26775 | 0.77 | +0.9 | |
1,360,345 | - | RR42_RS26775 | 0.87 | -1.0 | |
1,360,380 | + | -1.1 | |||
1,360,380 | + | -0.7 | |||
1,360,574 | + | +1.3 | |||
1,360,575 | - | -1.5 | |||
1,360,613 | + | +0.0 | |||
1,360,737 | - | -1.1 | |||
1,360,954 | + | RR42_RS26780 | 0.65 | -0.4 | |
1,360,954 | + | RR42_RS26780 | 0.65 | -0.3 | |
1,360,955 | - | RR42_RS26780 | 0.65 | -0.4 | |
1,360,955 | - | RR42_RS26780 | 0.65 | +0.4 | |
1,360,977 | + | RR42_RS26780 | 0.71 | -0.1 | |
1,360,977 | + | RR42_RS26780 | 0.71 | -0.9 | |
1,360,999 | - | RR42_RS26780 | 0.77 | -2.8 | |
1,361,263 | - | -0.8 | |||
1,361,263 | - | +1.6 | |||
1,361,263 | - | +0.1 | |||
1,361,263 | - | -0.3 | |||
1,361,474 | - | +0.7 | |||
1,361,474 | - | -1.7 | |||
1,361,555 | - | -4.5 | |||
1,361,749 | + | +0.6 | |||
1,361,750 | - | -0.9 |
Or see this region's nucleotide sequence