Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25895

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
1,149,691	-		RR42_RS25890	0.22	-1.8
1,149,867	+		RR42_RS25890	0.38	-1.7
1,149,867	+		RR42_RS25890	0.38	-0.9
1,149,867	+		RR42_RS25890	0.38	-0.1
1,150,011	+		RR42_RS25890	0.52	-0.5
1,150,011	+		RR42_RS25890	0.52	-0.3
1,150,011	+		RR42_RS25890	0.52	-1.5
1,150,012	-		RR42_RS25890	0.52	+3.3
1,150,062	+		RR42_RS25890	0.56	+0.1
1,150,063	-		RR42_RS25890	0.56	+0.5
1,150,218	-		RR42_RS25890	0.71	-2.2
1,150,218	-		RR42_RS25890	0.71	-3.0
1,150,391	-		RR42_RS25890	0.86	+0.6
1,150,537	-				-0.2
1,150,570	+				-2.3
1,150,570	+				+1.1
1,150,570	+				-0.8
1,150,570	+				+1.0
1,150,570	+				-2.2
1,150,571	-				-0.9
1,150,571	-				-1.9
1,150,764	-				+0.8
1,150,884	-		RR42_RS25895	0.25	+1.4
1,150,898	+		RR42_RS25895	0.27	+0.5
1,150,898	+		RR42_RS25895	0.27	+1.5
1,151,206	+		RR42_RS25895	0.67	+0.2
1,151,300	+		RR42_RS25895	0.79	+1.6
1,151,301	-		RR42_RS25895	0.79	+1.5
1,151,663	-				-2.0
1,151,668	-				+0.8
1,151,692	+				-0.2
1,151,692	+				+1.5
1,151,693	-				-0.7
1,151,794	-				+0.1
1,151,794	-				+1.5
1,151,875	+		RR42_RS25900	0.19	-0.7
1,151,875	+		RR42_RS25900	0.19	+1.9
1,151,875	+		RR42_RS25900	0.19	+2.1
1,151,875	+		RR42_RS25900	0.19	+0.2
1,151,876	-		RR42_RS25900	0.19	+0.4
1,151,876	-		RR42_RS25900	0.19	+0.8
1,151,981	+		RR42_RS25900	0.32	-3.3
1,151,981	+		RR42_RS25900	0.32	+0.1
1,151,981	+		RR42_RS25900	0.32	-1.8
1,151,981	+		RR42_RS25900	0.32	-0.0
1,152,002	+		RR42_RS25900	0.35	+1.0
1,152,003	-		RR42_RS25900	0.35	-1.5
1,152,209	+		RR42_RS25900	0.62	+0.8