Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20350
Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source Deoxyribonucleic from herring sperm 5 mg/mL |
---|---|---|---|---|---|
remove | |||||
4,402,146 | + | RR42_RS20345 | 0.56 | -0.9 | |
4,402,146 | + | RR42_RS20345 | 0.56 | -0.7 | |
4,402,146 | + | RR42_RS20345 | 0.56 | +0.5 | |
4,402,147 | - | RR42_RS20345 | 0.56 | -0.7 | |
4,402,322 | + | RR42_RS20345 | 0.64 | +0.5 | |
4,402,323 | - | RR42_RS20345 | 0.64 | -3.1 | |
4,402,560 | + | RR42_RS20345 | 0.74 | +0.7 | |
4,402,561 | - | RR42_RS20345 | 0.74 | +0.6 | |
4,402,561 | - | RR42_RS20345 | 0.74 | +1.2 | |
4,402,633 | - | RR42_RS20345 | 0.78 | -1.2 | |
4,402,861 | - | RR42_RS20345 | 0.88 | -0.8 | |
4,402,861 | - | RR42_RS20345 | 0.88 | -0.0 | |
4,403,205 | + | RR42_RS20350 | 0.12 | -1.4 | |
4,403,342 | + | RR42_RS20350 | 0.31 | +0.5 | |
4,403,343 | - | RR42_RS20350 | 0.31 | +0.5 | |
4,403,748 | - | RR42_RS20350 | 0.89 | -0.0 | |
4,403,868 | + | +1.1 | |||
4,403,868 | + | +0.5 | |||
4,403,881 | + | -0.6 | |||
4,403,881 | + | +0.6 | |||
4,403,974 | + | +1.2 | |||
4,403,974 | + | +1.7 | |||
4,403,975 | - | +0.7 | |||
4,403,980 | + | -0.6 | |||
4,403,981 | - | +0.0 | |||
4,403,981 | - | -0.4 | |||
4,404,172 | + | +2.0 | |||
4,404,172 | + | +0.2 | |||
4,404,173 | - | -0.0 |
Or see this region's nucleotide sequence