Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20120

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
4,347,159	+				-0.4
4,347,179	-				+0.7
4,347,179	-				+0.8
4,347,238	+				+2.4
4,347,238	+				+3.1
4,347,238	+				+1.1
4,347,239	-				-1.2
4,347,239	-				+0.2
4,347,294	-				-2.5
4,347,304	+				+3.0
4,347,304	+				+1.5
4,347,304	+				+0.1
4,347,304	+				-0.3
4,347,305	-				-0.1
4,347,305	-				+1.3
4,347,305	-				-1.1
4,347,327	+				-0.5
4,347,327	+				-1.2
4,347,327	+				+1.0
4,347,327	+				-1.0
4,347,327	+				+1.2
4,347,328	-				-0.8
4,347,328	-				-1.8
4,347,328	-				-0.4
4,347,328	-				+0.6
4,347,382	-				+0.3
4,347,404	+				+1.5
4,347,404	+				-0.5
4,347,404	+				-0.1
4,347,404	+				+1.0
4,347,405	-				+0.5
4,347,405	-				-0.3
4,347,405	-				-0.3
4,347,405	-				+1.3
4,347,405	-				+1.0
4,347,408	+				+0.8
4,347,408	+				-0.3
4,347,408	+				+1.4
4,347,409	-				-0.9
4,347,409	-				+0.7
4,347,409	-				-0.0
4,347,409	-				-0.8
4,347,414	+				-1.3
4,347,414	+				-1.4
4,347,414	+				+0.7
4,347,414	+				-0.3
4,347,414	+				-0.4
4,347,415	-				-0.5
4,347,415	-				+0.6
4,347,415	-				+1.4
4,347,536	+		RR42_RS20115	0.42	+0.1
4,347,552	+		RR42_RS20115	0.49	+0.5
4,347,553	-		RR42_RS20115	0.49	+0.2
4,347,553	-		RR42_RS20115	0.49	+0.6
4,347,553	-		RR42_RS20115	0.49	-1.1
4,347,559	+		RR42_RS20115	0.52	-1.6
4,347,559	+		RR42_RS20115	0.52	+1.0
4,347,560	-		RR42_RS20115	0.52	+1.3
4,347,560	-		RR42_RS20115	0.52	+0.7
4,347,594	+		RR42_RS20115	0.65	-1.1
4,347,594	+		RR42_RS20115	0.65	+0.2
4,347,678	+				+1.2
4,347,678	+				-0.5
4,347,678	+				+0.1
4,347,678	+				+1.1
4,347,678	+				-0.7
4,347,678	+				-0.2
4,347,679	-				-0.1
4,347,679	-				-0.6
4,347,679	-				+0.6
4,347,694	+				+1.2
4,347,695	-				-2.2
4,347,695	-				+0.7
4,347,695	-				-1.5
4,347,991	+				+0.5
4,347,992	-				+1.0
4,347,992	-				+0.5
4,347,996	+				+2.3
4,347,996	+				-0.1
4,347,996	+				-1.2
4,347,996	+				-0.8
4,347,996	+				+0.4
4,347,996	+				-0.0
4,347,997	-				-1.5
4,347,997	-				-1.5
4,347,997	-				+1.8
4,347,997	-				-1.3
4,347,997	-				+0.4
4,348,047	+				-3.1
4,348,047	+				-0.8
4,348,047	+				+0.0
4,348,048	-				+0.5
4,348,048	-				+0.1
4,348,048	-				+0.6
4,348,048	-				-0.7
4,348,089	+				+0.4
4,348,090	-				-0.5
4,348,147	-		RR42_RS20120	0.13	+0.5
4,348,209	+		RR42_RS20120	0.19	+1.2
4,348,209	+		RR42_RS20120	0.19	+0.8
4,348,209	+		RR42_RS20120	0.19	-2.4
4,348,210	-		RR42_RS20120	0.19	+1.2
4,348,210	-		RR42_RS20120	0.19	-0.5
4,348,210	-		RR42_RS20120	0.19	+0.1
4,348,210	-		RR42_RS20120	0.19	+0.9
4,348,257	+		RR42_RS20120	0.23	+0.7
4,348,258	-		RR42_RS20120	0.23	+2.2
4,348,258	-		RR42_RS20120	0.23	-1.3
4,348,258	-		RR42_RS20120	0.23	-0.2
4,348,258	-		RR42_RS20120	0.23	-0.8
4,348,606	-		RR42_RS20120	0.53	+1.1
4,348,737	+		RR42_RS20120	0.64	-1.7
4,348,737	+		RR42_RS20120	0.64	-1.5
4,348,738	-		RR42_RS20120	0.64	-1.5
4,348,738	-		RR42_RS20120	0.64	+0.1
4,348,785	+		RR42_RS20120	0.69	+0.6
4,348,785	+		RR42_RS20120	0.69	+1.1
4,348,786	-		RR42_RS20120	0.69	+0.5
4,348,917	-		RR42_RS20120	0.80	+1.5
4,348,917	-		RR42_RS20120	0.80	+0.5
4,349,008	-		RR42_RS20120	0.88	+0.5
4,349,160	+				-0.5
4,349,160	+				+1.1
4,349,160	+				+1.9
4,349,160	+				+0.1
4,349,161	-				-1.8
4,349,161	-				+1.2
4,349,161	-				-1.4
4,349,164	+				-0.1
4,349,164	+				-0.6
4,349,164	+				-0.6
4,349,164	+				-2.0
4,349,165	-				-0.8
4,349,165	-				+0.7
4,349,165	-				-0.6
4,349,165	-				+1.3
4,349,165	-				-0.7
4,349,165	-				+0.5
4,349,165	-				-0.4
4,349,165	-				+0.5
4,349,171	+				-1.3
4,349,172	-				-0.8
4,349,172	-				-1.6
4,349,172	-				-0.3
4,349,172	-				-1.0
4,349,172	-				-2.1
4,349,172	-				-0.8
4,349,173	+				-0.4
4,349,174	-				-0.8
4,349,236	-				-0.4
4,349,236	-				-2.2
4,349,382	-				-1.7
4,349,451	+				-0.3
4,349,547	+				+0.8
4,349,547	+				+0.9
4,349,547	+				+0.1
4,349,547	+				+0.3
4,349,548	-				-0.4
4,349,548	-				-0.0
4,349,548	-				-0.6
4,349,548	-				+0.3
4,349,625	+				+0.7
4,349,701	+		RR42_RS20125	0.10	+1.0
4,349,702	-		RR42_RS20125	0.10	+1.5
4,349,702	-		RR42_RS20125	0.10	-0.9
4,349,702	-		RR42_RS20125	0.10	+1.1
4,349,702	-		RR42_RS20125	0.10	+1.0
4,349,702	-		RR42_RS20125	0.10	+0.7
4,349,959	+		RR42_RS20125	0.17	+0.5
4,349,960	-		RR42_RS20125	0.17	-0.4
4,349,960	-		RR42_RS20125	0.17	-0.1
4,349,960	-		RR42_RS20125	0.17	+1.1
4,349,960	-		RR42_RS20125	0.17	+1.5
4,350,041	+		RR42_RS20125	0.19	-0.3
4,350,042	-		RR42_RS20125	0.19	+0.5
4,350,042	-		RR42_RS20125	0.19	-0.5
4,350,056	-		RR42_RS20125	0.19	-0.2