Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS20010 and RR42_RS20015 are separated by 751 nucleotides RR42_RS20015 and RR42_RS20020 are separated by 388 nucleotides
RR42_RS20010: RR42_RS20010 - hypothetical protein, at 4,322,565 to 4,322,930
_RS20010
RR42_RS20015: RR42_RS20015 - tRNA-Arg, at 4,323,682 to 4,323,757
_RS20015
RR42_RS20020: RR42_RS20020 - cytochrome C, at 4,324,146 to 4,325,027
_RS20020
Position (kb)
4323
4324 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4322.690 kb on - strand, within RR42_RS20010 at 4323.059 kb on + strand at 4323.059 kb on + strand at 4323.060 kb on - strand at 4323.094 kb on - strand at 4323.324 kb on - strand at 4323.324 kb on - strand at 4323.556 kb on - strand at 4323.625 kb on + strand at 4323.626 kb on - strand at 4323.651 kb on - strand at 4323.775 kb on - strand at 4323.818 kb on - strand at 4323.818 kb on - strand at 4323.818 kb on - strand at 4323.818 kb on - strand at 4323.924 kb on + strand at 4323.935 kb on + strand at 4323.935 kb on + strand at 4323.936 kb on - strand at 4324.035 kb on + strand at 4324.039 kb on - strand at 4324.093 kb on + strand at 4324.093 kb on + strand at 4324.093 kb on + strand at 4324.093 kb on + strand at 4324.093 kb on + strand at 4324.093 kb on + strand at 4324.093 kb on + strand at 4324.093 kb on + strand at 4324.094 kb on - strand at 4324.145 kb on + strand at 4324.145 kb on + strand at 4324.146 kb on - strand at 4324.311 kb on - strand, within RR42_RS20020 at 4324.407 kb on + strand, within RR42_RS20020 at 4324.408 kb on - strand, within RR42_RS20020 at 4324.408 kb on - strand, within RR42_RS20020 at 4324.408 kb on - strand, within RR42_RS20020 at 4324.408 kb on - strand, within RR42_RS20020 at 4324.408 kb on - strand, within RR42_RS20020 at 4324.461 kb on + strand, within RR42_RS20020 at 4324.462 kb on - strand, within RR42_RS20020 at 4324.579 kb on - strand, within RR42_RS20020 at 4324.611 kb on + strand, within RR42_RS20020 at 4324.611 kb on + strand, within RR42_RS20020 at 4324.611 kb on + strand, within RR42_RS20020
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Deoxyribonucleic from herring sperm 5 mg/mL remove 4,322,690 - RR42_RS20010 0.34 -0.1 4,323,059 + +0.9 4,323,059 + +1.0 4,323,060 - -0.1 4,323,094 - +0.1 4,323,324 - +0.2 4,323,324 - +1.1 4,323,556 - -3.5 4,323,625 + -0.1 4,323,626 - -0.2 4,323,651 - +1.6 4,323,775 - +2.2 4,323,818 - -0.6 4,323,818 - +1.2 4,323,818 - +0.9 4,323,818 - +0.6 4,323,924 + -1.5 4,323,935 + -1.7 4,323,935 + +0.5 4,323,936 - +0.3 4,324,035 + +0.7 4,324,039 - +3.4 4,324,093 + -0.3 4,324,093 + +1.4 4,324,093 + -2.0 4,324,093 + -1.1 4,324,093 + +2.7 4,324,093 + -0.8 4,324,093 + -0.6 4,324,093 + -0.0 4,324,094 - +2.6 4,324,145 + +3.1 4,324,145 + +2.3 4,324,146 - +1.9 4,324,311 - RR42_RS20020 0.19 +2.3 4,324,407 + RR42_RS20020 0.30 +2.8 4,324,408 - RR42_RS20020 0.30 +2.6 4,324,408 - RR42_RS20020 0.30 -2.7 4,324,408 - RR42_RS20020 0.30 +2.1 4,324,408 - RR42_RS20020 0.30 +1.9 4,324,408 - RR42_RS20020 0.30 +2.4 4,324,461 + RR42_RS20020 0.36 +1.5 4,324,462 - RR42_RS20020 0.36 +3.4 4,324,579 - RR42_RS20020 0.49 +3.2 4,324,611 + RR42_RS20020 0.53 +1.8 4,324,611 + RR42_RS20020 0.53 +1.9 4,324,611 + RR42_RS20020 0.53 +2.3
Or see this region's nucleotide sequence