Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS19905

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
4,298,283	+				-1.0
4,298,549	+				+0.4
4,298,561	-				+0.4
4,298,561	-				-0.2
4,298,561	-				+0.6
4,298,561	-				-1.9
4,298,565	+				+1.5
4,298,600	+				+0.1
4,298,600	+				+0.5
4,298,600	+				-2.3
4,298,710	-		RR42_RS19900	0.25	+3.9
4,299,094	+				+3.7
4,299,106	+				-1.6
4,299,107	-				+1.4
4,299,178	+		RR42_RS19905	0.10	+1.1
4,299,178	+		RR42_RS19905	0.10	+0.5
4,299,179	-		RR42_RS19905	0.10	-1.2
4,299,179	-		RR42_RS19905	0.10	-0.1
4,299,179	-		RR42_RS19905	0.10	-2.1
4,299,273	+		RR42_RS19905	0.35	+0.3
4,299,286	+		RR42_RS19905	0.39	-0.9
4,299,287	-		RR42_RS19905	0.39	-1.0
4,299,299	-		RR42_RS19905	0.42	-1.8
4,299,299	-		RR42_RS19905	0.42	+0.2
4,299,403	-		RR42_RS19905	0.70	-2.6
4,299,682	+				+0.7
4,299,682	+				-0.8
4,299,682	+				-1.6
4,299,682	+				-0.1
4,299,683	-				-0.7
4,299,835	+				+0.3
4,299,835	+				+1.9
4,299,876	-		RR42_RS19910	0.11	-1.9
4,300,130	-		RR42_RS19910	0.28	+1.2
4,300,130	-		RR42_RS19910	0.28	-1.6
4,300,157	-		RR42_RS19910	0.30	+0.6
4,300,157	-		RR42_RS19910	0.30	-0.2
4,300,157	-		RR42_RS19910	0.30	-0.5
4,300,273	+		RR42_RS19910	0.38	+0.2
4,300,274	-		RR42_RS19910	0.38	+0.9
4,300,274	-		RR42_RS19910	0.38	+1.5
4,300,339	+		RR42_RS19910	0.42	+0.0