Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS19865
Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source Deoxyribonucleic from herring sperm 5 mg/mL |
---|---|---|---|---|---|
remove | |||||
4,287,636 | - | +0.2 | |||
4,287,981 | + | RR42_RS19860 | 0.40 | -0.7 | |
4,288,313 | + | RR42_RS19860 | 0.76 | -1.3 | |
4,288,533 | + | -3.4 | |||
4,288,574 | - | -2.6 | |||
4,288,793 | + | RR42_RS19865 | 0.13 | -0.7 | |
4,288,793 | + | RR42_RS19865 | 0.13 | +0.5 | |
4,289,108 | + | RR42_RS19865 | 0.37 | -3.9 | |
4,289,109 | - | RR42_RS19865 | 0.37 | -0.5 | |
4,289,109 | - | RR42_RS19865 | 0.37 | -0.4 | |
4,289,320 | + | RR42_RS19865 | 0.53 | -0.8 | |
4,289,320 | + | RR42_RS19865 | 0.53 | -2.9 | |
4,289,321 | - | RR42_RS19865 | 0.53 | -0.3 | |
4,289,935 | + | -1.7 | |||
4,290,899 | + | RR42_RS19870 | 0.61 | -0.2 | |
4,290,900 | - | RR42_RS19870 | 0.61 | -0.1 | |
4,290,900 | - | RR42_RS19870 | 0.61 | +1.2 | |
4,290,900 | - | RR42_RS19870 | 0.61 | +0.3 |
Or see this region's nucleotide sequence