Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS18860

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
4,088,219	+				+1.5
4,088,220	-				-0.2
4,088,220	-				-2.1
4,088,220	-				+1.7
4,088,381	+		RR42_RS18855	0.16	+2.9
4,088,381	+		RR42_RS18855	0.16	+3.2
4,088,382	-		RR42_RS18855	0.16	+1.9
4,088,400	+		RR42_RS18855	0.20	+1.8
4,088,683	+		RR42_RS18855	0.75	+2.1
4,088,683	+		RR42_RS18855	0.75	+3.7
4,088,684	-		RR42_RS18855	0.75	+3.1
4,088,684	-		RR42_RS18855	0.75	+4.5
4,088,963	-				+0.7
4,088,963	-				-0.1
4,089,363	-				-0.7
4,089,423	-		RR42_RS18865	0.17	+0.5
4,089,423	-		RR42_RS18865	0.17	+0.2
4,089,423	-		RR42_RS18865	0.17	-0.3
4,089,423	-		RR42_RS18865	0.17	-1.5
4,089,423	-		RR42_RS18865	0.17	+0.1
4,089,522	+		RR42_RS18865	0.45	-1.1
4,089,522	+		RR42_RS18865	0.45	+0.5
4,089,523	-		RR42_RS18865	0.45	-0.8
4,089,619	-		RR42_RS18865	0.72	+0.2
4,089,619	-		RR42_RS18865	0.72	-1.9
4,089,619	-		RR42_RS18865	0.72	-1.1
4,089,650	+		RR42_RS18865	0.81	+0.7
4,089,650	+		RR42_RS18865	0.81	-2.1
4,089,650	+		RR42_RS18865	0.81	-1.9
4,089,650	+		RR42_RS18865	0.81	-0.9
4,089,651	-		RR42_RS18865	0.81	+1.7
4,089,651	-		RR42_RS18865	0.81	+0.8
4,089,651	-		RR42_RS18865	0.81	-1.7
4,089,651	-		RR42_RS18865	0.81	-1.3
4,089,809	-				+0.5
4,089,809	-				+1.5
4,089,832	+		RR42_RS18870	0.11	-0.6
4,089,832	+		RR42_RS18870	0.11	-1.7
4,089,833	-		RR42_RS18870	0.12	+0.6
4,089,833	-		RR42_RS18870	0.12	+0.9
4,089,833	-		RR42_RS18870	0.12	-0.3
4,089,833	-		RR42_RS18870	0.12	+0.6
4,089,851	+		RR42_RS18870	0.17	+1.6
4,089,856	+		RR42_RS18870	0.18	-1.6
4,089,856	+		RR42_RS18870	0.18	-0.3
4,089,856	+		RR42_RS18870	0.18	+0.6
4,089,856	+				+1.5
4,089,856	+		RR42_RS18870	0.18	-1.3
4,089,856	+		RR42_RS18870	0.18	-2.6
4,089,857	-		RR42_RS18870	0.18	-0.7
4,089,857	-		RR42_RS18870	0.18	+0.5
4,089,857	-		RR42_RS18870	0.18	-0.1
4,089,997	+		RR42_RS18870	0.55	-1.5
4,089,997	+		RR42_RS18870	0.55	-0.5
4,089,997	+		RR42_RS18870	0.55	-0.3
4,089,997	+		RR42_RS18870	0.55	+1.2
4,089,998	-		RR42_RS18870	0.56	-0.4
4,089,998	-		RR42_RS18870	0.56	+1.1
4,089,998	-		RR42_RS18870	0.56	-3.0
4,089,998	-		RR42_RS18870	0.56	+1.5
4,089,998	-		RR42_RS18870	0.56	-1.2
4,089,998	-		RR42_RS18870	0.56	+0.2
4,089,998	-		RR42_RS18870	0.56	-0.1
4,090,031	-		RR42_RS18870	0.65	-1.7
4,090,031	-		RR42_RS18870	0.65	-1.5
4,090,087	+		RR42_RS18870	0.79	+0.1
4,090,087	+		RR42_RS18870	0.79	-0.5
4,090,087	+		RR42_RS18870	0.79	-2.0
4,090,097	-		RR42_RS18870	0.82	-2.1
4,090,189	+				+1.0
4,090,189	+				+0.3
4,090,190	-				-0.6