Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS18190

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,940,115	+		RR42_RS18185	0.19	+0.8
3,940,115	+		RR42_RS18185	0.19	+0.4
3,940,115	+		RR42_RS18185	0.19	-1.3
3,940,180	+		RR42_RS18185	0.25	-0.0
3,940,337	+		RR42_RS18185	0.38	+0.4
3,940,430	+		RR42_RS18185	0.46	-0.0
3,940,446	-		RR42_RS18185	0.48	-2.6
3,940,537	+		RR42_RS18185	0.55	+0.9
3,940,537	+		RR42_RS18185	0.55	+0.4
3,940,538	-		RR42_RS18185	0.55	+1.2
3,940,540	+		RR42_RS18185	0.56	+1.1
3,940,540	+		RR42_RS18185	0.56	-0.6
3,940,541	-		RR42_RS18185	0.56	+0.1
3,940,541	-		RR42_RS18185	0.56	+0.7
3,940,541	-		RR42_RS18185	0.56	+1.2
3,940,673	+		RR42_RS18185	0.67	-0.2
3,940,673	+		RR42_RS18185	0.67	-0.5
3,940,673	+		RR42_RS18185	0.67	-0.7
3,940,673	+		RR42_RS18185	0.67	+0.7
3,940,674	-		RR42_RS18185	0.67	+0.2
3,940,674	-		RR42_RS18185	0.67	+1.8
3,940,675	+		RR42_RS18185	0.67	+0.1
3,940,841	+		RR42_RS18185	0.81	+0.7
3,940,971	-				+0.5
3,941,115	+				-1.0
3,941,115	+				+0.8
3,941,334	+		RR42_RS18190	0.21	+0.2
3,941,335	-		RR42_RS18190	0.21	+3.3
3,941,397	+		RR42_RS18190	0.27	+0.0
3,941,397	+		RR42_RS18190	0.27	-0.2
3,941,398	-		RR42_RS18190	0.27	-0.0
3,941,398	-		RR42_RS18190	0.27	-2.0
3,941,398	-		RR42_RS18190	0.27	+1.4
3,941,460	+		RR42_RS18190	0.32	+0.5
3,941,460	+		RR42_RS18190	0.32	-0.5
3,941,461	-		RR42_RS18190	0.33	-0.7
3,941,461	-		RR42_RS18190	0.33	+1.6
3,941,685	+		RR42_RS18190	0.54	+0.6
3,941,686	-		RR42_RS18190	0.54	+1.1
3,941,779	-		RR42_RS18190	0.62	+0.3
3,942,265	+				-0.1
3,942,265	+				-1.4
3,942,265	+				-1.0
3,942,266	-				+1.2
3,942,266	-				+0.2
3,942,266	-				-0.7
3,942,373	-		RR42_RS18195	0.20	+0.9
3,942,373	-		RR42_RS18195	0.20	+0.5
3,942,407	+		RR42_RS18195	0.23	-0.6
3,942,408	-		RR42_RS18195	0.23	-2.4
3,942,408	-		RR42_RS18195	0.23	-1.3
3,942,471	-		RR42_RS18195	0.30	-1.2
3,942,572	+		RR42_RS18195	0.40	+0.0
3,942,572	+		RR42_RS18195	0.40	+0.2
3,943,009	-		RR42_RS18195	0.83	+0.5
3,943,009	-		RR42_RS18195	0.83	+0.7