Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15545

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,357,577	-		RR42_RS15540	0.46	+1.7
3,357,601	+		RR42_RS15540	0.48	-0.4
3,357,602	-		RR42_RS15540	0.48	-0.1
3,357,691	+		RR42_RS15540	0.54	+0.5
3,357,691	+		RR42_RS15540	0.54	-1.0
3,357,692	-		RR42_RS15540	0.54	+0.2
3,357,835	-		RR42_RS15540	0.64	-0.9
3,357,858	+		RR42_RS15540	0.66	-2.2
3,357,859	-		RR42_RS15540	0.66	-0.2
3,357,952	+		RR42_RS15540	0.72	+0.6
3,357,953	-		RR42_RS15540	0.72	-0.9
3,357,953	-		RR42_RS15540	0.72	+1.0
3,358,057	+		RR42_RS15540	0.80	-0.0
3,358,124	+		RR42_RS15540	0.84	+1.6
3,358,124	+		RR42_RS15540	0.84	-2.5
3,358,125	-		RR42_RS15540	0.84	+0.5
3,358,125	-		RR42_RS15540	0.84	+0.6
3,358,125	-		RR42_RS15540	0.84	-0.5
3,358,181	+		RR42_RS15540	0.88	+1.0
3,358,181	+		RR42_RS15540	0.88	+2.2
3,358,385	+				+0.4
3,358,385	+				-0.3
3,358,385	+				-1.8
3,358,386	-				+0.7
3,358,386	-				-0.7
3,358,487	-		RR42_RS15545	0.17	+0.9
3,358,500	+		RR42_RS15545	0.20	-1.4
3,358,501	-		RR42_RS15545	0.20	-0.3
3,358,501	-		RR42_RS15545	0.20	+0.9
3,358,519	+		RR42_RS15545	0.24	+0.7
3,358,520	-		RR42_RS15545	0.24	-0.9
3,358,520	-		RR42_RS15545	0.24	+0.8
3,358,520	-		RR42_RS15545	0.24	-0.4
3,358,520	-		RR42_RS15545	0.24	-0.2
3,359,093	-		RR42_RS15550	0.39	+1.9
3,359,255	+		RR42_RS15550	0.67	+0.8
3,359,255	+		RR42_RS15550	0.67	-0.2
3,359,255	+		RR42_RS15550	0.67	+1.3
3,359,256	-		RR42_RS15550	0.68	-0.4
3,359,256	-		RR42_RS15550	0.68	-0.8
3,359,256	-		RR42_RS15550	0.68	+0.9
3,359,455	+				-2.0
3,359,455	+				-0.4
3,359,455	+				-0.2
3,359,455	+				-0.4