Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15395

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,327,557	+				-1.0
3,327,557	+				-1.3
3,327,557	+				+0.7
3,327,557	+				+0.5
3,327,557	+				+1.1
3,327,558	-				-0.5
3,327,558	-				-1.0
3,327,558	-				-3.1
3,327,558	-				-0.8
3,327,993	+		RR42_RS15390	0.43	+1.3
3,327,994	-		RR42_RS15390	0.44	-3.0
3,328,030	-		RR42_RS15390	0.48	+2.6
3,328,144	-		RR42_RS15390	0.61	-1.1
3,328,296	+		RR42_RS15390	0.78	-0.7
3,328,296	+		RR42_RS15390	0.78	+1.0
3,328,297	-		RR42_RS15390	0.78	-1.2
3,328,297	-		RR42_RS15390	0.78	+1.0
3,328,297	-		RR42_RS15390	0.78	+0.4
3,328,297	-		RR42_RS15390	0.78	-0.4
3,328,297	-		RR42_RS15390	0.78	+0.6
3,328,303	+		RR42_RS15390	0.79	-0.8
3,328,304	-		RR42_RS15390	0.79	-1.0
3,328,304	-		RR42_RS15390	0.79	-0.7
3,328,422	+				-2.7
3,328,423	-				-1.4
3,328,423	-				-1.0
3,328,507	+				-3.2
3,328,508	-				-0.6
3,328,508	-				+0.6
3,328,508	-				-1.8
3,328,638	-		RR42_RS15395	0.11	-2.9
3,328,742	+		RR42_RS15395	0.24	+0.7
3,328,742	+		RR42_RS15395	0.24	+0.0
3,328,871	+		RR42_RS15395	0.39	-0.8
3,328,871	+		RR42_RS15395	0.39	+1.5
3,328,964	+		RR42_RS15395	0.51	+0.8
3,328,964	+		RR42_RS15395	0.51	-2.8
3,328,964	+		RR42_RS15395	0.51	-1.1
3,329,013	-		RR42_RS15395	0.57	-0.9
3,329,082	-		RR42_RS15395	0.65	-1.0
3,329,082	-		RR42_RS15395	0.65	-2.1
3,329,082	-		RR42_RS15395	0.65	-3.6
3,329,082	-		RR42_RS15395	0.65	-1.6
3,329,086	+		RR42_RS15395	0.66	+0.7
3,329,087	-		RR42_RS15395	0.66	+0.5
3,329,114	+		RR42_RS15395	0.69	-2.1
3,329,114	+		RR42_RS15395	0.69	-2.3
3,329,114	+		RR42_RS15395	0.69	+0.1
3,329,115	-		RR42_RS15395	0.69	-1.8
3,329,128	-		RR42_RS15395	0.71	-1.6
3,329,402	+				+3.2
3,329,403	-				+0.8
3,329,429	-				+1.1
3,329,502	-				-1.4
3,329,577	+				-0.8
3,329,577	+				-0.3
3,329,577	+				-0.9
3,329,577	+				-0.3
3,329,577	+				+0.1
3,329,578	-				+0.7
3,329,578	-				-1.2
3,329,578	-				+0.5
3,329,578	-				-2.3
3,329,578	-				+0.3
3,329,676	+				-2.4
3,329,676	+				-0.4
3,329,677	-				+0.5
3,329,677	-				-0.7
3,329,677	-				-0.6
3,329,817	+		RR42_RS15400	0.20	+0.3
3,329,817	+		RR42_RS15400	0.20	-1.1
3,329,817	+		RR42_RS15400	0.20	-3.3
3,329,817	+		RR42_RS15400	0.20	-1.2
3,329,818	-		RR42_RS15400	0.20	-1.8
3,329,827	-		RR42_RS15400	0.21	-0.6
3,329,949	+		RR42_RS15400	0.31	-0.1
3,329,950	-		RR42_RS15400	0.31	-0.8
3,329,950	-		RR42_RS15400	0.31	+0.5
3,330,064	-		RR42_RS15400	0.41	-0.9