Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15285

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,306,392	+		RR42_RS15280	0.59	-1.1
3,306,392	+		RR42_RS15280	0.59	-0.1
3,306,452	+		RR42_RS15280	0.62	+3.0
3,306,452	+		RR42_RS15280	0.62	-0.2
3,306,455	-		RR42_RS15280	0.62	+0.6
3,306,601	+		RR42_RS15280	0.71	-1.1
3,306,602	-		RR42_RS15280	0.71	+0.7
3,306,625	+		RR42_RS15280	0.72	-2.0
3,306,626	-		RR42_RS15280	0.72	-0.3
3,306,745	+		RR42_RS15280	0.79	-1.6
3,306,745	+		RR42_RS15280	0.79	-0.6
3,306,745	+		RR42_RS15280	0.79	+1.0
3,306,745	+		RR42_RS15280	0.79	-2.9
3,306,745	+		RR42_RS15280	0.79	+1.2
3,306,746	-		RR42_RS15280	0.79	-2.0
3,306,746	-		RR42_RS15280	0.79	-2.7
3,306,820	+		RR42_RS15280	0.83	+0.4
3,306,820	+		RR42_RS15280	0.83	+0.1
3,306,821	-		RR42_RS15280	0.84	-0.3
3,306,851	+		RR42_RS15280	0.85	-0.8
3,306,851	+		RR42_RS15280	0.85	+1.5
3,306,852	-		RR42_RS15280	0.85	-2.8
3,306,852	-		RR42_RS15280	0.85	+1.2
3,306,852	-		RR42_RS15280	0.85	+0.1
3,306,853	+		RR42_RS15280	0.85	+0.8
3,306,853	+		RR42_RS15280	0.85	+0.9
3,306,854	-		RR42_RS15280	0.85	-0.3
3,306,854	-		RR42_RS15280	0.85	+1.6
3,306,854	-		RR42_RS15280	0.85	+0.1
3,306,854	-		RR42_RS15280	0.85	-0.6
3,306,854	-		RR42_RS15280	0.85	-1.8
3,306,854	-		RR42_RS15280	0.85	+1.6
3,307,013	-				+1.3
3,307,013	-				-2.7
3,307,103	+				+0.5
3,307,123	+				-1.2
3,307,190	-				-1.4
3,307,226	+				+0.9
3,307,226	+				-0.6
3,307,295	-				-0.6
3,307,295	-				+0.3
3,307,374	+				-0.5
3,307,375	-				-2.2
3,307,375	-				-0.3
3,307,666	+		RR42_RS15285	0.36	-0.8
3,307,667	-		RR42_RS15285	0.36	-0.8
3,307,678	-		RR42_RS15285	0.37	-1.3
3,307,811	+		RR42_RS15285	0.53	+0.2
3,307,811	+		RR42_RS15285	0.53	+0.2
3,307,811	+		RR42_RS15285	0.53	+0.7
3,307,811	+		RR42_RS15285	0.53	-0.4
3,307,811	+		RR42_RS15285	0.53	+0.2
3,307,812	-		RR42_RS15285	0.53	-0.1
3,307,812	-		RR42_RS15285	0.53	-3.5
3,307,812	-		RR42_RS15285	0.53	+0.7
3,307,902	-		RR42_RS15285	0.64	-1.4
3,308,048	+		RR42_RS15285	0.81	-0.5
3,308,207	+				+3.0
3,308,207	+				+1.0
3,308,208	-				-0.4
3,308,208	-				-0.8
3,308,208	-				-1.6
3,308,248	-				-0.8
3,308,398	+		RR42_RS15290	0.32	+1.2
3,308,399	-		RR42_RS15290	0.32	-1.9
3,308,662	+				+0.3
3,308,671	+				-1.6
3,308,671	+				-1.2
3,308,672	-				-0.8
3,308,672	-				+0.1
3,308,672	-				-2.0
3,308,672	-				+1.3
3,308,672	-				-3.3
3,309,119	+				-1.7
3,309,119	+				-2.1