Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14940

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,230,254	+		RR42_RS14935	0.63	-0.2
3,230,254	+		RR42_RS14935	0.63	+0.5
3,230,494	+		RR42_RS14935	0.77	+1.2
3,230,551	+		RR42_RS14935	0.80	+0.8
3,230,551	+		RR42_RS14935	0.80	+0.6
3,230,552	-		RR42_RS14935	0.80	+0.1
3,230,554	+		RR42_RS14935	0.80	-0.7
3,230,825	-				+0.9
3,230,930	-				+0.9
3,230,930	-				-3.5
3,230,949	+				-0.3
3,230,949	+				+0.0
3,230,950	-				-0.0
3,230,985	-				+1.4
3,230,985	-				-2.1
3,231,112	+				+0.6
3,231,191	+		RR42_RS14940	0.13	+0.9
3,231,192	-		RR42_RS14940	0.13	-0.2
3,231,192	-		RR42_RS14940	0.13	+0.2
3,231,269	+		RR42_RS14940	0.18	+0.1
3,231,270	-		RR42_RS14940	0.18	-1.0
3,231,411	-		RR42_RS14940	0.27	+0.6
3,231,462	-		RR42_RS14940	0.30	-0.3
3,231,462	-		RR42_RS14940	0.30	-1.2
3,231,545	+		RR42_RS14940	0.36	+0.1
3,231,545	+		RR42_RS14940	0.36	+0.6
3,231,546	-		RR42_RS14940	0.36	-0.8
3,231,546	-		RR42_RS14940	0.36	-1.6
3,231,600	-		RR42_RS14940	0.39	-0.4
3,231,600	-		RR42_RS14940	0.39	-1.1
3,231,615	+		RR42_RS14940	0.40	-0.1
3,231,713	+		RR42_RS14940	0.46	-1.4
3,231,752	-		RR42_RS14940	0.49	-0.2
3,232,203	-		RR42_RS14940	0.77	+0.1
3,232,203	-		RR42_RS14940	0.77	+0.4
3,232,298	+		RR42_RS14940	0.83	+1.0
3,232,298	+		RR42_RS14940	0.83	-3.2
3,232,389	-		RR42_RS14940	0.89	+0.6
3,232,389	-		RR42_RS14940	0.89	+2.0
3,232,549	+				-3.7
3,232,549	+				-2.0
3,232,555	+				-0.2
3,232,570	+				-2.6
3,232,571	-				-0.2
3,232,745	-				+0.9
3,232,887	-				-0.5
3,232,887	-				+0.4
3,232,899	+				+0.6
3,232,967	-				+1.3
3,232,967	-				-1.6
3,233,020	+		RR42_RS14945	0.23	-0.8
3,233,021	-		RR42_RS14945	0.23	+0.7
3,233,113	+		RR42_RS14945	0.51	-0.3
3,233,212	-		RR42_RS14945	0.80	+0.6
3,233,212	-		RR42_RS14945	0.80	+1.7
3,233,298	-				-0.1
3,233,378	+				-1.0
3,233,379	-				-2.0
3,233,396	+		RR42_RS14950	0.13	-0.3
3,233,417	+		RR42_RS14950	0.18	+0.4