Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14840

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,197,827	+		RR42_RS14835	0.55	+0.9
3,197,827	+		RR42_RS14835	0.55	-0.3
3,198,044	-		RR42_RS14835	0.68	+1.0
3,198,053	-		RR42_RS14835	0.69	-2.1
3,198,053	-		RR42_RS14835	0.69	-0.4
3,198,236	-		RR42_RS14835	0.80	-0.3
3,198,236	-		RR42_RS14835	0.80	-0.4
3,198,680	+				+1.2
3,198,680	+				+0.3
3,198,680	+				+0.2
3,198,680	+				-0.2
3,198,681	-				-1.0
3,198,681	-				+1.3
3,198,681	-				+0.6
3,198,684	+				-0.4
3,198,684	+				-0.4
3,198,684	+				-1.0
3,198,722	-				-1.9
3,198,733	-				-0.9
3,198,865	+		RR42_RS14840	0.14	-0.4
3,198,866	-		RR42_RS14840	0.14	+1.5
3,198,866	-		RR42_RS14840	0.14	+1.0
3,199,010	+		RR42_RS14840	0.32	-2.5
3,199,190	+		RR42_RS14840	0.55	+0.5
3,199,251	-		RR42_RS14840	0.63	-1.8
3,199,251	-		RR42_RS14840	0.63	-0.6
3,199,487	+				-0.8
3,199,487	+				-0.7
3,199,631	-				-0.3
3,199,899	+		RR42_RS14845	0.42	-0.3
3,199,900	-		RR42_RS14845	0.43	+0.8
3,199,902	+		RR42_RS14845	0.43	+0.8
3,200,162	-				+0.4
3,200,315	+				+0.3
3,200,315	+				-0.7
3,200,319	+				-0.9
3,200,364	-				-1.1
3,200,400	+				-2.9
3,200,400	+				-1.4
3,200,401	-				-1.0
3,200,448	-				-0.2
3,200,448	-				+1.7