Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14835

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,196,170	+		RR42_RS14830	0.42	+1.2
3,196,211	+		RR42_RS14830	0.46	+1.4
3,196,261	+		RR42_RS14830	0.51	+0.5
3,196,296	+		RR42_RS14830	0.55	+1.7
3,196,296	+		RR42_RS14830	0.55	+1.1
3,196,297	-		RR42_RS14830	0.55	+0.2
3,196,297	-		RR42_RS14830	0.55	+0.9
3,196,464	+		RR42_RS14830	0.72	+2.7
3,196,465	-		RR42_RS14830	0.72	+0.3
3,196,647	+		RR42_RS14830	0.90	-0.4
3,196,750	+				+1.2
3,196,750	+				-1.1
3,196,750	+				-0.2
3,196,751	-				-2.1
3,196,754	+				-0.7
3,196,754	+				-0.8
3,197,117	-		RR42_RS14835	0.12	+0.1
3,197,117	-		RR42_RS14835	0.12	+0.1
3,197,146	+		RR42_RS14835	0.14	+1.7
3,197,146	+		RR42_RS14835	0.14	-0.4
3,197,147	-		RR42_RS14835	0.14	-1.8
3,197,147	-		RR42_RS14835	0.14	+0.5
3,197,147	-		RR42_RS14835	0.14	+3.8
3,197,429	-		RR42_RS14835	0.31	+1.7
3,197,827	+		RR42_RS14835	0.55	+0.9
3,197,827	+		RR42_RS14835	0.55	-0.3
3,198,044	-		RR42_RS14835	0.68	+1.0
3,198,053	-		RR42_RS14835	0.69	-2.1
3,198,053	-		RR42_RS14835	0.69	-0.4
3,198,236	-		RR42_RS14835	0.80	-0.3
3,198,236	-		RR42_RS14835	0.80	-0.4
3,198,680	+				+1.2
3,198,680	+				+0.3
3,198,680	+				+0.2
3,198,680	+				-0.2
3,198,681	-				-1.0
3,198,681	-				+1.3
3,198,681	-				+0.6
3,198,684	+				-0.4
3,198,684	+				-0.4
3,198,684	+				-1.0
3,198,722	-				-1.9
3,198,733	-				-0.9
3,198,865	+		RR42_RS14840	0.14	-0.4
3,198,866	-		RR42_RS14840	0.14	+1.5
3,198,866	-		RR42_RS14840	0.14	+1.0
3,199,010	+		RR42_RS14840	0.32	-2.5
3,199,190	+		RR42_RS14840	0.55	+0.5
3,199,251	-		RR42_RS14840	0.63	-1.8
3,199,251	-		RR42_RS14840	0.63	-0.6
3,199,487	+				-0.8
3,199,487	+				-0.7