Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14800

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,187,280	+				-0.6
3,187,281	-				-0.7
3,187,284	+				+1.2
3,187,285	-				+0.1
3,187,297	+				+0.2
3,187,297	+				+0.2
3,187,298	-				-0.7
3,187,298	-				+2.5
3,187,302	+				-1.4
3,187,303	-				-1.7
3,187,518	-		RR42_RS14795	0.20	+0.6
3,187,518	-		RR42_RS14795	0.20	+0.7
3,187,518	-		RR42_RS14795	0.20	+0.8
3,187,580	+		RR42_RS14795	0.29	-1.4
3,187,767	-		RR42_RS14795	0.56	+0.0
3,187,877	+		RR42_RS14795	0.71	-0.5
3,187,877	+		RR42_RS14795	0.71	-0.9
3,187,877	+		RR42_RS14795	0.71	+1.4
3,187,877	+		RR42_RS14795	0.71	-2.9
3,187,877	+		RR42_RS14795	0.71	+0.9
3,187,878	-		RR42_RS14795	0.72	-1.4
3,187,878	-		RR42_RS14795	0.72	+0.3
3,187,878	-		RR42_RS14795	0.72	+0.0
3,187,988	+		RR42_RS14795	0.87	-0.9
3,187,988	+		RR42_RS14795	0.87	-1.2
3,187,989	-		RR42_RS14795	0.87	+0.2
3,187,989	-		RR42_RS14795	0.87	-0.1
3,187,989	-		RR42_RS14795	0.87	-0.0
3,187,989	-		RR42_RS14795	0.87	-2.3
3,187,989	-		RR42_RS14795	0.87	+0.2
3,187,989	-		RR42_RS14795	0.87	-0.8
3,187,989	-		RR42_RS14795	0.87	+0.2
3,187,992	-		RR42_RS14795	0.88	+0.2
3,188,010	+				+0.5
3,188,010	+				+0.6
3,188,010	+				+0.5
3,188,011	-				-0.2
3,188,011	-				-0.6
3,188,011	-				-1.2
3,188,011	-				-0.4
3,188,011	-				-0.2
3,188,011	-				+0.5
3,188,015	+				+2.8
3,188,042	+				+0.4
3,188,043	-				-0.5
3,188,120	+				+1.8
3,188,121	-				-1.3
3,188,180	-				-2.9
3,188,200	-				-0.8
3,188,332	+		RR42_RS14800	0.11	+0.4
3,188,332	+		RR42_RS14800	0.11	-1.1
3,188,332	+		RR42_RS14800	0.11	+0.7
3,188,333	-		RR42_RS14800	0.11	+0.4
3,188,333	-		RR42_RS14800	0.11	-2.9
3,188,333	-		RR42_RS14800	0.11	-2.5
3,188,333	-		RR42_RS14800	0.11	-0.8
3,188,333	-		RR42_RS14800	0.11	-0.0
3,188,333	-		RR42_RS14800	0.11	-0.6
3,188,333	-		RR42_RS14800	0.11	-2.7
3,188,333	-		RR42_RS14800	0.11	+0.2
3,188,333	-		RR42_RS14800	0.11	-0.2
3,188,333	-		RR42_RS14800	0.11	-2.1
3,188,333	-		RR42_RS14800	0.11	-0.5
3,188,572	+		RR42_RS14800	0.37	-1.4
3,188,573	-		RR42_RS14800	0.37	-1.1
3,188,573	-		RR42_RS14800	0.37	+0.8
3,188,678	-		RR42_RS14800	0.49	-0.9
3,188,678	-		RR42_RS14800	0.49	-0.5
3,188,829	+		RR42_RS14800	0.65	-1.1
3,189,149	-				+0.6
3,189,149	-				-1.5
3,189,149	-				-0.8
3,189,206	-				-0.1
3,189,230	+				-2.2
3,189,230	+				-0.2
3,189,468	-		RR42_RS14805	0.28	-0.4
3,189,510	-		RR42_RS14805	0.33	-0.0
3,189,510	-		RR42_RS14805	0.33	+1.2
3,189,765	-		RR42_RS14805	0.60	-1.7
3,189,893	+		RR42_RS14805	0.74	-0.1