Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14690

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,165,554	+		RR42_RS14685	0.84	-1.4
3,165,647	+		RR42_RS14685	0.89	+0.5
3,165,648	-		RR42_RS14685	0.89	-0.0
3,165,865	-				+0.2
3,165,997	+				-1.1
3,165,997	+				-2.5
3,165,998	-				-0.4
3,166,132	+				-0.8
3,166,132	+				+0.0
3,166,132	+				-0.5
3,166,132	+				+0.6
3,166,133	-				-1.6
3,166,133	-				-0.2
3,166,133	-				+0.7
3,166,133	-				+1.2
3,166,133	-				+1.0
3,166,155	+				+1.2
3,166,161	+				-0.1
3,166,161	+				-0.4
3,166,162	-				+0.5
3,166,332	+				+0.3
3,166,332	+				-0.1
3,166,333	-				+0.5
3,166,622	+		RR42_RS14690	0.23	-2.6
3,166,821	-		RR42_RS14690	0.44	-2.5
3,166,821	-		RR42_RS14690	0.44	+0.3
3,166,821	-		RR42_RS14690	0.44	-1.2
3,166,821	-		RR42_RS14690	0.44	+0.4
3,167,058	-		RR42_RS14690	0.70	-0.8
3,167,094	-		RR42_RS14690	0.74	+1.2
3,167,201	+		RR42_RS14690	0.85	-2.1
3,167,202	-		RR42_RS14690	0.85	+0.6
3,167,226	-		RR42_RS14690	0.88	-0.8
3,167,288	+				+0.3
3,167,289	-				+0.2
3,167,289	-				-0.4
3,167,289	-				-0.8
3,167,392	+				+1.6
3,167,456	+				-0.4
3,167,456	+				+0.5
3,167,456	+				-2.1
3,167,456	+				+0.6
3,167,457	-				+0.5
3,167,457	-				-2.8
3,167,457	-				-0.9
3,167,457	-				-0.2
3,167,457	-				+0.5
3,167,457	-				-0.7
3,167,457	-				+0.6
3,167,458	+				+0.9
3,167,459	-				-2.1
3,167,643	-		RR42_RS14695	0.16	-1.2
3,167,643	-		RR42_RS14695	0.16	-1.3
3,167,643	-		RR42_RS14695	0.16	+0.9
3,167,946	+		RR42_RS14695	0.41	-0.6
3,167,946	+		RR42_RS14695	0.41	+0.1
3,167,976	+		RR42_RS14695	0.43	+0.6
3,167,976	+		RR42_RS14695	0.43	+1.1
3,167,976	+		RR42_RS14695	0.43	-0.6
3,167,977	-		RR42_RS14695	0.44	+0.8
3,168,034	+		RR42_RS14695	0.48	-0.2
3,168,034	+		RR42_RS14695	0.48	-1.9
3,168,034	+		RR42_RS14695	0.48	-0.3
3,168,189	+		RR42_RS14695	0.61	-1.8
3,168,190	-		RR42_RS14695	0.61	-1.6
3,168,196	+		RR42_RS14695	0.62	-0.6
3,168,197	-		RR42_RS14695	0.62	-0.6
3,168,197	-		RR42_RS14695	0.62	-0.2
3,168,197	-		RR42_RS14695	0.62	-0.4
3,168,197	-		RR42_RS14695	0.62	+0.7
3,168,284	+		RR42_RS14695	0.69	-0.3
3,168,336	+		RR42_RS14695	0.74	-0.6
3,168,338	+		RR42_RS14695	0.74	-0.2
3,168,338	+		RR42_RS14695	0.74	-1.3