Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13435

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,897,156	-		RR42_RS13430	0.63	+2.9
2,897,212	+		RR42_RS13430	0.67	+0.4
2,897,212	+		RR42_RS13430	0.67	-2.5
2,897,240	-		RR42_RS13430	0.69	+1.5
2,897,335	+		RR42_RS13430	0.75	-0.3
2,897,335	+		RR42_RS13430	0.75	+0.1
2,897,441	+		RR42_RS13430	0.82	+0.3
2,897,441	+		RR42_RS13430	0.82	-0.6
2,897,442	-		RR42_RS13430	0.82	-0.2
2,897,442	-		RR42_RS13430	0.82	+2.2
2,897,545	+		RR42_RS13430	0.89	+0.9
2,897,607	+				-0.1
2,897,607	+				-1.4
2,897,607	+				-2.6
2,897,740	+				+0.9
2,897,765	+				+2.7
2,897,766	-				-1.1
2,897,766	-				+0.2
2,897,766	-				-0.9
2,897,799	-				-2.5
2,897,805	+				+1.4
2,897,865	+				+0.0
2,897,904	+				+0.5
2,897,904	+				-0.5
2,897,904	+				-0.9
2,897,965	-				-1.3
2,898,030	+				-0.9
2,898,031	-				-0.4
2,898,031	-				-1.9
2,898,145	+		RR42_RS13435	0.12	-1.2
2,898,399	-		RR42_RS13435	0.24	-0.9
2,898,506	-		RR42_RS13435	0.29	-1.2
2,898,564	+		RR42_RS13435	0.32	-3.0
2,898,564	+		RR42_RS13435	0.32	-3.6
2,898,584	-		RR42_RS13435	0.33	-1.0
2,898,584	-		RR42_RS13435	0.33	-0.7
2,898,584	-		RR42_RS13435	0.33	-2.8
2,898,633	+		RR42_RS13435	0.35	-1.9
2,898,779	-		RR42_RS13435	0.42	-1.1
2,898,949	+		RR42_RS13435	0.50	+0.2
2,899,011	-		RR42_RS13435	0.53	-0.8
2,899,030	+		RR42_RS13435	0.54	-2.9
2,899,189	+		RR42_RS13435	0.62	+2.0
2,899,190	-		RR42_RS13435	0.62	-4.3
2,899,190	-		RR42_RS13435	0.62	-2.8
2,899,190	-		RR42_RS13435	0.62	-2.9
2,899,309	+		RR42_RS13435	0.67	-0.2
2,899,309	+		RR42_RS13435	0.67	-2.2
2,899,310	-		RR42_RS13435	0.67	-1.5
2,899,334	-		RR42_RS13435	0.69	-0.7
2,899,579	+		RR42_RS13435	0.80	-2.2
2,899,580	-		RR42_RS13435	0.80	-1.3
2,899,580	-		RR42_RS13435	0.80	-2.2
2,899,580	-		RR42_RS13435	0.80	-1.2
2,899,580	-		RR42_RS13435	0.80	-1.5
2,899,718	-		RR42_RS13435	0.87	-1.0
2,899,720	+		RR42_RS13435	0.87	-3.8
2,899,721	-		RR42_RS13435	0.87	+1.0
2,899,750	+		RR42_RS13435	0.88	-0.8
2,899,826	+				-1.6
2,899,912	+				-1.3
2,899,913	-				-3.2
2,900,105	+				-2.0
2,900,111	+				-0.9
2,900,111	+				+0.5
2,900,111	+				+0.8
2,900,111	+				-0.1
2,900,111	+				-0.9
2,900,112	-				+1.5
2,900,112	-				-0.2
2,900,113	+				-0.3
2,900,300	+		RR42_RS13440	0.18	+2.4
2,900,400	-		RR42_RS13440	0.25	-1.1
2,900,402	-		RR42_RS13440	0.25	-0.1
2,900,672	-		RR42_RS13440	0.45	-0.0
2,900,941	+		RR42_RS13440	0.65	+1.5
2,900,941	+		RR42_RS13440	0.65	-1.7
2,900,941	+		RR42_RS13440	0.65	-0.4
2,900,942	-		RR42_RS13440	0.66	-0.6
2,900,942	-		RR42_RS13440	0.66	-0.2