Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12460

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,678,028	-		RR42_RS12455	0.81	+0.8
2,678,028	-		RR42_RS12455	0.81	-0.5
2,678,433	-				+0.9
2,678,517	-				+0.3
2,678,626	-				-0.1
2,678,685	+				+0.2
2,678,968	+		RR42_RS12460	0.28	-2.0
2,678,969	-		RR42_RS12460	0.28	-1.8
2,679,039	+		RR42_RS12460	0.35	-1.8
2,679,039	+		RR42_RS12460	0.35	+0.9
2,679,039	+		RR42_RS12460	0.35	+1.6
2,679,040	-		RR42_RS12460	0.35	-3.1
2,679,040	-		RR42_RS12460	0.35	+0.2
2,679,040	-		RR42_RS12460	0.35	-0.3
2,679,040	-		RR42_RS12460	0.35	-0.3
2,679,073	-		RR42_RS12460	0.39	-2.1
2,679,073	-		RR42_RS12460	0.39	-0.3
2,679,073	-		RR42_RS12460	0.39	+1.2
2,679,073	-		RR42_RS12460	0.39	-0.0
2,679,073	-		RR42_RS12460	0.39	+0.1
2,679,139	-		RR42_RS12460	0.46	-0.1
2,679,145	+		RR42_RS12460	0.47	+0.5
2,679,146	-		RR42_RS12460	0.47	-0.5
2,679,645	+				-0.1
2,679,645	+				-0.4
2,679,646	-				-2.0
2,679,646	-				+1.4
2,679,649	+				-2.4
2,679,649	+				-2.2
2,679,650	-				+0.0
2,679,650	-				-0.5
2,679,650	-				-3.2
2,679,650	-				-0.3
2,679,656	-				-0.2
2,679,656	-				-1.0
2,679,779	-				+0.0
2,679,822	-				+0.3
2,679,878	+		RR42_RS12465	0.11	+0.7
2,679,878	+		RR42_RS12465	0.11	-0.3
2,679,879	-		RR42_RS12465	0.11	-0.5
2,679,935	+		RR42_RS12465	0.13	-0.5
2,679,935	+		RR42_RS12465	0.13	-0.1
2,679,935	+		RR42_RS12465	0.13	+0.5
2,679,935	+		RR42_RS12465	0.13	-2.0
2,679,936	-		RR42_RS12465	0.13	-0.6
2,679,984	-		RR42_RS12465	0.16	-0.8
2,679,984	-		RR42_RS12465	0.16	-0.2
2,680,196	+		RR42_RS12465	0.25	-0.4
2,680,196	+		RR42_RS12465	0.25	-0.3
2,680,196	-		RR42_RS12465	0.25	+0.1
2,680,197	-		RR42_RS12465	0.25	+1.0
2,680,197	-		RR42_RS12465	0.25	+1.1
2,680,197	-		RR42_RS12465	0.25	-0.0
2,680,607	+		RR42_RS12465	0.44	-0.0
2,680,607	+		RR42_RS12465	0.44	-3.5