Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12420

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,665,942	+		RR42_RS12415	0.21	+1.4
2,665,943	-		RR42_RS12415	0.21	+0.2
2,665,970	+		RR42_RS12415	0.24	+2.3
2,665,970	+		RR42_RS12415	0.24	-1.2
2,665,970	+		RR42_RS12415	0.24	-0.4
2,665,970	+		RR42_RS12415	0.24	-0.4
2,666,156	+		RR42_RS12415	0.43	-1.7
2,666,157	-		RR42_RS12415	0.43	-0.3
2,666,243	+		RR42_RS12415	0.51	+1.5
2,666,243	+		RR42_RS12415	0.51	-0.0
2,666,243	+		RR42_RS12415	0.51	+0.2
2,666,243	+		RR42_RS12415	0.51	+0.3
2,666,243	+		RR42_RS12415	0.51	-0.5
2,666,243	+		RR42_RS12415	0.51	-1.2
2,666,244	-		RR42_RS12415	0.51	+0.6
2,666,244	-		RR42_RS12415	0.51	+1.5
2,666,244	-		RR42_RS12415	0.51	+1.1
2,666,396	+		RR42_RS12415	0.67	-2.6
2,666,396	+		RR42_RS12415	0.67	-0.5
2,666,664	+				+1.3
2,666,664	+				+0.5
2,666,665	-				+0.8
2,666,665	-				-0.9
2,666,689	-				-2.1
2,666,736	+				+0.9
2,666,737	-				+0.7
2,666,737	-				+0.7
2,666,737	-				-0.9
2,666,737	-				+1.0
2,666,743	-				+2.2
2,666,908	+				-2.1
2,666,908	+				-4.5
2,667,126	+		RR42_RS12420	0.29	+0.5
2,667,321	+		RR42_RS12420	0.46	+0.1
2,667,322	-		RR42_RS12420	0.46	-1.0
2,667,322	-		RR42_RS12420	0.46	+1.6
2,667,500	+		RR42_RS12420	0.61	+0.6
2,667,501	-		RR42_RS12420	0.61	-0.7
2,667,501	-		RR42_RS12420	0.61	+2.2
2,667,554	+		RR42_RS12420	0.66	+1.3
2,667,587	+		RR42_RS12420	0.69	-1.7
2,667,587	+		RR42_RS12420	0.69	+0.7
2,667,587	+		RR42_RS12420	0.69	-0.3
2,667,587	+		RR42_RS12420	0.69	+1.2
2,667,587	+		RR42_RS12420	0.69	-0.2
2,667,587	+		RR42_RS12420	0.69	-3.8
2,667,587	+		RR42_RS12420	0.69	+0.9
2,667,588	-		RR42_RS12420	0.69	+0.8
2,667,618	+		RR42_RS12420	0.71	-0.0
2,667,618	+		RR42_RS12420	0.71	+0.6
2,667,624	-		RR42_RS12420	0.72	+0.6
2,667,624	-		RR42_RS12420	0.72	-1.9
2,667,889	-				+0.6
2,668,128	+		RR42_RS12425	0.19	+0.4