Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12140

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,604,737	+		RR42_RS12135	0.67	+0.9
2,604,870	+		RR42_RS12135	0.73	-0.2
2,604,870	+		RR42_RS12135	0.73	+0.3
2,605,101	+		RR42_RS12135	0.83	-0.2
2,605,101	+		RR42_RS12135	0.83	-2.0
2,605,101	+		RR42_RS12135	0.83	-0.4
2,605,101	+		RR42_RS12135	0.83	+0.7
2,605,102	-		RR42_RS12135	0.83	+0.4
2,605,104	+		RR42_RS12135	0.83	-0.5
2,605,105	-		RR42_RS12135	0.83	+0.7
2,605,229	-		RR42_RS12135	0.89	+0.5
2,605,239	-		RR42_RS12135	0.90	-3.3
2,605,315	+				-1.3
2,605,316	-				+1.0
2,605,332	+				+0.0
2,605,332	+				+1.0
2,605,332	+				-0.3
2,605,333	-				+1.5
2,605,410	+				-0.4
2,605,411	-				-0.0
2,605,568	-				-0.8
2,605,660	+				+1.0
2,605,782	+				-1.1
2,605,783	-				-0.9
2,605,840	-		RR42_RS12140	0.13	+0.0
2,605,867	-		RR42_RS12140	0.16	+1.0
2,606,102	-		RR42_RS12140	0.38	+0.6
2,606,205	+		RR42_RS12140	0.48	-2.0
2,606,210	-		RR42_RS12140	0.49	+0.7
2,606,210	-		RR42_RS12140	0.49	+2.2
2,606,298	+		RR42_RS12140	0.57	-0.4
2,606,299	-		RR42_RS12140	0.57	-1.0
2,606,385	+		RR42_RS12140	0.65	+0.8
2,606,386	-		RR42_RS12140	0.65	+1.5
2,606,386	-		RR42_RS12140	0.65	-2.0
2,606,394	+		RR42_RS12140	0.66	-0.2
2,606,395	-		RR42_RS12140	0.66	+1.0
2,606,395	-		RR42_RS12140	0.66	-1.1
2,606,440	-		RR42_RS12140	0.71	+0.5
2,606,440	-		RR42_RS12140	0.71	-0.6
2,606,707	+				-0.6
2,606,707	+				+0.6
2,606,843	+				+0.2
2,606,844	-				-0.2
2,606,930	+				+1.0
2,606,930	+				-0.4
2,606,930	+				+0.1
2,606,930	+				+0.0
2,606,930	+				+1.5
2,606,931	-				+0.3
2,606,939	-				+0.6
2,606,939	-				+1.3
2,606,939	-				-0.4
2,607,054	-				-0.2
2,607,105	+				+2.2
2,607,139	+				+1.0
2,607,139	+				-1.0
2,607,140	-				+0.0
2,607,247	+				-1.2
2,607,247	+				+0.9
2,607,247	+				+0.4
2,607,247	+				+0.5
2,607,248	-				+0.3
2,607,259	+				-1.1
2,607,346	+				-2.0
2,607,346	+				-2.0
2,607,347	-				-1.1
2,607,347	-				+0.0
2,607,347	-				-2.9
2,607,583	+		RR42_RS12145	0.15	-0.4
2,607,665	-		RR42_RS12145	0.17	+0.3