Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10220

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,186,448	+		RR42_RS10215	0.27	-1.4
2,186,448	+		RR42_RS10215	0.27	-0.9
2,186,449	-		RR42_RS10215	0.27	-0.5
2,186,450	+		RR42_RS10215	0.27	-1.1
2,186,450	+		RR42_RS10215	0.27	+0.6
2,186,450	+		RR42_RS10215	0.27	-1.4
2,186,451	-		RR42_RS10215	0.27	-0.0
2,186,451	-		RR42_RS10215	0.27	-1.7
2,186,451	-		RR42_RS10215	0.27	-0.7
2,186,640	-		RR42_RS10215	0.45	+1.4
2,186,822	+		RR42_RS10215	0.61	-0.2
2,186,841	-		RR42_RS10215	0.63	+0.3
2,186,876	-		RR42_RS10215	0.66	+0.5
2,187,011	+		RR42_RS10215	0.78	+0.5
2,187,052	+		RR42_RS10215	0.82	-0.5
2,187,052	+		RR42_RS10215	0.82	+0.4
2,187,101	+		RR42_RS10215	0.86	+0.8
2,187,101	+		RR42_RS10215	0.86	+1.4
2,187,102	-		RR42_RS10215	0.86	+1.0
2,187,105	-		RR42_RS10215	0.86	-1.2
2,187,259	+				-0.4
2,187,259	+				-2.4
2,187,259	+				-0.2
2,187,265	-				-0.6
2,187,614	+		RR42_RS10220	0.39	-0.9
2,187,615	-		RR42_RS10220	0.39	-1.9
2,187,615	-		RR42_RS10220	0.39	-0.8
2,187,615	-		RR42_RS10220	0.39	+0.8
2,187,618	+		RR42_RS10220	0.40	-1.1
2,187,743	+		RR42_RS10220	0.66	-1.4
2,187,745	+		RR42_RS10220	0.66	+0.6
2,187,764	-		RR42_RS10220	0.70	+0.1
2,187,884	+				+0.4
2,187,885	-				+0.4
2,187,885	-				+1.6
2,188,134	+		RR42_RS10225	0.21	-0.5
2,188,134	+		RR42_RS10225	0.21	-1.6
2,188,167	+		RR42_RS10225	0.24	-2.8
2,188,167	+		RR42_RS10225	0.24	-1.4
2,188,404	+		RR42_RS10225	0.49	-1.3
2,188,404	+		RR42_RS10225	0.49	+0.9
2,188,663	+		RR42_RS10225	0.75	-0.5
2,188,843	+				-0.5
2,188,843	+				+0.8
2,188,844	-				+1.2