Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10180

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,177,954	+				+1.3
2,177,955	-				+0.2
2,177,969	+				+2.5
2,178,118	-				-1.4
2,178,136	-				-0.8
2,178,169	-				-0.4
2,178,217	+				+1.1
2,178,217	+				-0.6
2,178,218	-				-3.1
2,178,229	+				+0.3
2,178,267	+				+0.2
2,178,414	-		RR42_RS10170	0.23	-1.6
2,178,427	+		RR42_RS10170	0.29	+0.9
2,178,569	+				-1.6
2,178,570	-				-1.6
2,178,570	-				+1.4
2,178,724	+		RR42_RS10175	0.39	+1.3
2,178,724	+		RR42_RS10175	0.39	-0.1
2,178,724	+		RR42_RS10175	0.39	+0.2
2,178,725	-		RR42_RS10175	0.39	-2.2
2,178,725	-		RR42_RS10175	0.39	-1.2
2,178,752	+		RR42_RS10175	0.50	-1.4
2,178,817	+		RR42_RS10175	0.74	+3.8
2,178,817	+		RR42_RS10175	0.74	+1.4
2,178,817	+		RR42_RS10175	0.74	-1.4
2,178,818	-		RR42_RS10175	0.75	-1.4
2,178,818	-		RR42_RS10175	0.75	+1.2
2,178,820	+		RR42_RS10175	0.75	+0.5
2,178,820	+		RR42_RS10175	0.75	+0.2
2,178,857	-		RR42_RS10175	0.89	-0.6
2,179,074	+		RR42_RS10180	0.10	-0.5
2,179,148	+		RR42_RS10180	0.16	-1.6
2,179,148	+		RR42_RS10180	0.16	-1.9
2,179,622	-		RR42_RS10180	0.53	+0.3
2,179,654	+		RR42_RS10180	0.56	+0.9
2,179,655	-		RR42_RS10180	0.56	-0.1
2,179,758	+		RR42_RS10180	0.64	+0.1
2,179,900	-		RR42_RS10180	0.75	-1.0
2,179,900	-		RR42_RS10180	0.75	+1.0
2,179,975	+		RR42_RS10180	0.81	-0.1
2,179,975	+		RR42_RS10180	0.81	-1.5
2,179,976	-		RR42_RS10180	0.81	-0.6
2,179,993	+		RR42_RS10180	0.83	-0.6
2,180,024	-		RR42_RS10180	0.85	-3.5
2,180,046	-		RR42_RS10180	0.87	-0.4
2,180,046	-		RR42_RS10180	0.87	+1.1
2,180,063	-		RR42_RS10180	0.88	-1.5
2,180,063	-		RR42_RS10180	0.88	-0.2
2,180,182	+				+1.9
2,180,182	+				+0.7
2,180,183	-				-0.8
2,180,317	+				+2.1
2,180,318	-				-3.1
2,180,318	-				-0.7
2,180,411	+				-0.9
2,180,501	+		RR42_RS10185	0.15	+0.4
2,180,502	-		RR42_RS10185	0.16	+0.6
2,180,627	+		RR42_RS10185	0.25	-0.5
2,180,628	-		RR42_RS10185	0.25	+1.3
2,180,694	+		RR42_RS10185	0.30	-3.6
2,180,841	-		RR42_RS10185	0.41	+0.5
2,180,883	+		RR42_RS10185	0.44	+0.7
2,180,921	+		RR42_RS10185	0.47	-4.0
2,180,921	+		RR42_RS10185	0.47	-3.1
2,180,921	+		RR42_RS10185	0.47	+0.4
2,180,948	+		RR42_RS10185	0.49	+0.9
2,180,948	+		RR42_RS10185	0.49	+1.2
2,180,972	-		RR42_RS10185	0.51	+1.0
2,180,972	-		RR42_RS10185	0.51	+0.4
2,181,043	+		RR42_RS10185	0.56	+0.4
2,181,062	+		RR42_RS10185	0.58	+0.9
2,181,062	+		RR42_RS10185	0.58	-0.3
2,181,132	+		RR42_RS10185	0.63	+0.3
2,181,133	-		RR42_RS10185	0.63	+1.0
2,181,133	-		RR42_RS10185	0.63	-0.4
2,181,133	-		RR42_RS10185	0.63	+0.0
2,181,133	-		RR42_RS10185	0.63	+1.7
2,181,146	+		RR42_RS10185	0.64	+0.4
2,181,171	-		RR42_RS10185	0.66	-1.4
2,181,212	+		RR42_RS10185	0.69	-0.3
2,181,212	+		RR42_RS10185	0.69	-0.4