Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09930

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,117,478	-		RR42_RS09920	0.51	+1.1
2,117,530	+		RR42_RS09920	0.59	-1.8
2,117,543	+		RR42_RS09920	0.61	-1.0
2,117,544	-		RR42_RS09920	0.61	-2.6
2,117,612	+		RR42_RS09920	0.71	-0.5
2,117,613	-		RR42_RS09920	0.71	-2.4
2,117,733	-				-0.3
2,117,733	-				-0.0
2,117,849	+				+1.0
2,117,850	-				-2.5
2,117,896	+				-1.5
2,117,993	+				+0.0
2,117,993	+				+0.7
2,117,993	+				+1.0
2,117,994	-				-1.4
2,117,996	+				-1.3
2,117,996	+				-0.5
2,117,996	+				+2.2
2,117,997	-				-0.8
2,117,997	-				+0.3
2,117,997	-				-1.6
2,117,997	-				-0.6
2,117,997	-				-2.0
2,117,997	-				-0.1
2,117,997	-				+1.0
2,118,005	+				+1.9
2,118,118	-				+0.4
2,118,339	-		RR42_RS09925	0.45	+1.0
2,118,488	+				+0.7
2,118,573	+				-1.6
2,118,573	+		RR42_RS09930	0.24	+1.4
2,118,574	-		RR42_RS09930	0.24	-2.8
2,118,727	-		RR42_RS09930	0.61	+1.0
2,118,727	-		RR42_RS09930	0.61	-1.0
2,118,786	+		RR42_RS09930	0.75	-0.8
2,118,846	+		RR42_RS09930	0.89	+1.7
2,118,847	-		RR42_RS09930	0.89	+0.2
2,118,888	+				-0.6
2,118,888	+				-3.1
2,118,889	-				-1.0
2,118,889	-				+3.1
2,118,889	-				-0.6
2,118,980	+				-1.0
2,118,980	+				-0.5
2,118,980	+				+0.5
2,118,980	+				-0.3
2,118,980	+				+3.0
2,118,981	-				+0.7
2,118,983	-				+2.8
2,118,999	+				-1.8
2,119,000	-				+0.0
2,119,067	-				+1.1
2,119,067	-				+1.1
2,119,153	-				+0.8
2,119,240	+				-1.2
2,119,241	-				+0.1
2,119,244	+				-0.4
2,119,244	+				-0.6
2,119,395	+				+0.2
2,119,395	+				+1.1
2,119,395	+				+0.4
2,119,395	+				-0.5
2,119,395	+				-1.3
2,119,395	+				-2.4
2,119,395	+				-2.7
2,119,447	-				+0.4
2,119,447	-				+0.3
2,119,486	+		RR42_RS09935	0.12	+0.3
2,119,487	-		RR42_RS09935	0.12	-1.8
2,119,732	+		RR42_RS09935	0.39	-0.3
2,119,732	+		RR42_RS09935	0.39	-0.0
2,119,732	+		RR42_RS09935	0.39	-1.3
2,119,732	+		RR42_RS09935	0.39	-0.4
2,119,733	-		RR42_RS09935	0.39	+1.1
2,119,733	-		RR42_RS09935	0.39	+1.5
2,119,733	-		RR42_RS09935	0.39	+0.6
2,119,828	+		RR42_RS09935	0.49	-3.1
2,119,828	+		RR42_RS09935	0.49	-1.3
2,119,829	-		RR42_RS09935	0.49	+0.9