Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09740

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,073,487	+		RR42_RS09735	0.69	+1.0
2,073,610	+		RR42_RS09735	0.73	-3.3
2,073,611	-		RR42_RS09735	0.73	+0.7
2,073,611	-		RR42_RS09735	0.73	+1.3
2,073,612	+		RR42_RS09735	0.73	-3.0
2,073,613	-		RR42_RS09735	0.73	+0.7
2,073,613	-		RR42_RS09735	0.73	-0.8
2,073,613	-		RR42_RS09735	0.73	+1.4
2,073,731	-		RR42_RS09735	0.78	+1.7
2,073,732	+		RR42_RS09735	0.78	+1.5
2,073,732	+		RR42_RS09735	0.78	+0.4
2,073,733	-		RR42_RS09735	0.78	+1.2
2,073,733	-		RR42_RS09735	0.78	+0.5
2,073,757	+		RR42_RS09735	0.79	+1.1
2,073,757	+		RR42_RS09735	0.79	+0.2
2,073,757	+		RR42_RS09735	0.79	-1.8
2,074,204	+				+0.4
2,074,204	+				-0.9
2,074,204	+				+0.5
2,074,205	-				+0.7
2,074,290	+				+2.3
2,074,460	-		RR42_RS09740	0.11	-1.0
2,074,501	+		RR42_RS09740	0.15	+1.0
2,074,501	+		RR42_RS09740	0.15	+1.0
2,074,502	-		RR42_RS09740	0.15	-0.6
2,074,502	-		RR42_RS09740	0.15	+0.0
2,074,537	+		RR42_RS09740	0.18	+0.3
2,074,538	-		RR42_RS09740	0.18	+1.0
2,074,681	+		RR42_RS09740	0.33	+1.0
2,074,681	+		RR42_RS09740	0.33	+0.5
2,074,681	+		RR42_RS09740	0.33	+0.5
2,074,681	+		RR42_RS09740	0.33	+0.1
2,074,681	+		RR42_RS09740	0.33	+0.4
2,074,681	+		RR42_RS09740	0.33	-1.4
2,074,681	+		RR42_RS09740	0.33	+0.8
2,074,682	-		RR42_RS09740	0.33	+0.4
2,074,682	-		RR42_RS09740	0.33	-2.2
2,074,682	-		RR42_RS09740	0.33	-1.5
2,074,682	-		RR42_RS09740	0.33	+0.7
2,074,682	-		RR42_RS09740	0.33	+0.0
2,074,686	-		RR42_RS09740	0.33	+0.7
2,074,686	-		RR42_RS09740	0.33	+0.5
2,074,781	+		RR42_RS09740	0.43	+0.5
2,074,957	+		RR42_RS09740	0.61	-2.1
2,075,095	-		RR42_RS09740	0.75	+2.2
2,075,095	-		RR42_RS09740	0.75	+0.1
2,075,183	-		RR42_RS09740	0.84	-0.1
2,075,240	-		RR42_RS09740	0.90	+0.0
2,075,240	-		RR42_RS09740	0.90	-2.9
2,075,240	-		RR42_RS09740	0.90	+0.4
2,075,240	-		RR42_RS09740	0.90	+1.1
2,075,310	+				-0.0
2,075,310	+				+0.4
2,075,311	-				+1.5
2,075,319	-				-0.2
2,075,479	-				-1.0
2,075,479	-				-0.0
2,075,554	+				+1.1
2,075,555	-				+0.4
2,075,555	-				+2.1
2,075,555	-				+1.7
2,075,555	-				-3.2
2,075,557	+				-0.6
2,075,558	-				-0.8
2,075,558	-				-1.6
2,075,558	-				-0.9
2,075,558	-				+0.1
2,075,558	-				+0.2
2,075,587	+				-0.5
2,075,587	+				+0.5
2,075,588	-				-1.6
2,075,827	+		RR42_RS09745	0.21	+0.3
2,076,097	-		RR42_RS09745	0.48	-0.6
2,076,097	-		RR42_RS09745	0.48	+2.0
2,076,198	+		RR42_RS09745	0.58	+1.2
2,076,198	+		RR42_RS09745	0.58	+2.5
2,076,212	-		RR42_RS09745	0.60	-1.0
2,076,222	+		RR42_RS09745	0.61	+1.0
2,076,222	+		RR42_RS09745	0.61	-0.7
2,076,222	+		RR42_RS09745	0.61	+1.5
2,076,243	+		RR42_RS09745	0.63	+0.4
2,076,252	+		RR42_RS09745	0.63	+0.4
2,076,268	+		RR42_RS09745	0.65	+0.8
2,076,269	-		RR42_RS09745	0.65	+1.5
2,076,322	-		RR42_RS09745	0.70	+0.1
2,076,322	-		RR42_RS09745	0.70	+0.9