Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09625

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,036,717	+		RR42_RS09620	0.37	+0.5
2,036,718	-		RR42_RS09620	0.37	-0.0
2,036,718	-		RR42_RS09620	0.37	+0.7
2,036,800	+		RR42_RS09620	0.44	-0.6
2,036,801	-		RR42_RS09620	0.44	+0.9
2,036,801	-		RR42_RS09620	0.44	-0.5
2,037,065	+		RR42_RS09620	0.65	-0.0
2,037,066	-		RR42_RS09620	0.65	-1.0
2,037,066	-		RR42_RS09620	0.65	+2.8
2,037,563	+				-0.0
2,037,563	+				+0.5
2,037,564	-				+1.0
2,037,564	-				-2.7
2,037,709	+				+1.0
2,037,710	-				-0.9
2,038,213	+		RR42_RS09625	0.29	-1.0
2,039,155	+				+2.8
2,039,156	-		RR42_RS09625	0.70	+1.2
2,039,210	+		RR42_RS09625	0.73	+0.1
2,039,215	-		RR42_RS09625	0.73	+0.1
2,039,215	-		RR42_RS09625	0.73	+0.2
2,039,215	-		RR42_RS09625	0.73	-4.0
2,039,528	+		RR42_RS09625	0.86	-1.6
2,039,528	+		RR42_RS09625	0.86	+0.7
2,039,529	-		RR42_RS09625	0.86	-0.0
2,039,751	-				+0.1
2,039,820	-				+0.5
2,039,820	-				-0.1
2,039,841	+				+0.1
2,039,924	+		RR42_RS09630	0.12	-1.6
2,039,980	-		RR42_RS09630	0.29	-1.4
2,039,980	-		RR42_RS09630	0.29	-0.6
2,040,173	+		RR42_RS09630	0.87	-2.6
2,040,275	+				-1.0
2,040,275	+				-0.4
2,040,275	+				-0.8
2,040,276	-				-0.9
2,040,276	-				-1.0
2,040,276	-				+0.7
2,040,276	-				+1.1
2,040,276	-				-0.3
2,040,281	+				-0.5
2,040,281	+				+0.7
2,040,282	-				+1.0
2,040,283	+				+0.7
2,040,283	+				+0.5
2,040,283	+				+1.4
2,040,283	+				-0.9
2,040,284	-				-3.0
2,040,284	-				-3.3
2,040,284	-				-3.7
2,040,284	-				-1.0
2,040,284	-				-0.4
2,040,284	-				+0.3
2,040,628	+		RR42_RS09635	0.27	+2.2
2,040,632	-		RR42_RS09635	0.28	+0.8
2,040,686	-		RR42_RS09635	0.35	+1.0