Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09560

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,024,878	+		RR42_RS09550	0.67	-0.3
2,024,878	+		RR42_RS09550	0.67	-0.1
2,024,878	+		RR42_RS09550	0.67	-1.2
2,024,878	+		RR42_RS09550	0.67	+1.5
2,024,878	+		RR42_RS09550	0.67	-1.1
2,024,878	+		RR42_RS09550	0.67	-1.1
2,024,879	-		RR42_RS09550	0.67	+0.0
2,024,900	+		RR42_RS09550	0.71	-2.8
2,024,920	+		RR42_RS09550	0.76	-0.9
2,024,920	+		RR42_RS09550	0.76	-1.1
2,024,920	+		RR42_RS09550	0.76	-0.3
2,024,931	+		RR42_RS09550	0.78	-1.2
2,024,932	-		RR42_RS09550	0.79	-0.6
2,024,932	-		RR42_RS09550	0.79	-0.2
2,024,980	-		RR42_RS09550	0.89	-0.3
2,024,980	-		RR42_RS09550	0.89	-0.3
2,025,016	-				-0.0
2,025,016	-				+2.3
2,025,025	+				+2.0
2,025,025	+				-0.4
2,025,025	+				+1.0
2,025,073	+				-1.4
2,025,111	+				-2.5
2,025,112	-				-0.7
2,025,112	-				-0.3
2,025,112	-				+0.4
2,025,132	+				-0.3
2,025,132	+				-1.4
2,025,133	-				+0.9
2,025,133	-				-0.6
2,025,133	-				-3.2
2,025,218	-				-0.7
2,025,244	+				+0.0
2,025,300	+				+1.5
2,025,300	+				+0.9
2,025,301	-				-0.3
2,025,309	+				-0.3
2,025,309	+				+0.7
2,025,310	-				-0.9
2,025,432	+		RR42_RS09555	0.25	-0.4
2,025,432	+		RR42_RS09555	0.25	+1.9
2,025,432	+		RR42_RS09555	0.25	-2.2
2,025,695	-		RR42_RS09555	0.78	-0.8
2,026,038	+		RR42_RS09560	0.39	+1.6
2,026,039	-		RR42_RS09560	0.39	+0.5
2,026,039	-		RR42_RS09560	0.39	+0.4
2,026,131	-		RR42_RS09560	0.54	-0.8
2,026,306	+		RR42_RS09560	0.83	+0.4
2,026,307	-		RR42_RS09560	0.83	-0.6
2,026,393	-				-2.1
2,026,443	+				-0.1
2,026,444	-				-3.0
2,026,447	-				+0.8
2,026,594	+		RR42_RS09565	0.32	+0.1
2,026,594	+		RR42_RS09565	0.32	-0.2
2,026,595	-		RR42_RS09565	0.33	-0.2
2,027,308	+		RR42_RS09570	0.20	-0.4